Merge pull request #1856 from hypothesis/import-annotator

Import Annotator

h/static/scripts/annotator/anchors.coffee

+# Abstract anchor class.
+class Anchor
+
+  constructor: (@annotator, @annotation, @target
+      @startPage, @endPage,
+      @quote, @diffHTML, @diffCaseOnly) ->
+
+    unless @annotator? then throw "annotator is required!"
+    unless @annotation? then throw "annotation is required!"
+    unless @target? then throw "target is required!"
+    unless @startPage? then "startPage is required!"
+    unless @endPage? then throw "endPage is required!"
+    unless @quote? then throw "quote is required!"
+
+    @highlight = {}
+
+  # Return highlights for the given page
+  _createHighlight: (page) ->
+    throw "Function not implemented"
+
+  # Create the missing highlights for this anchor
+  realize: () =>
+    return if @fullyRealized # If we have everything, go home
+
+    # Collect the pages that are already rendered
+    renderedPages = [@startPage .. @endPage].filter (index) =>
+      @annotator.domMapper.isPageMapped index
+
+    # Collect the pages that are already rendered, but not yet anchored
+    pagesTodo = renderedPages.filter (index) => not @highlight[index]?
+
+    return unless pagesTodo.length # Return if nothing to do
+
+    # Create the new highlights
+    created = for page in pagesTodo
+      @highlight[page] = @_createHighlight page
+
+    # Check if everything is rendered now
+    @fullyRealized = renderedPages.length is @endPage - @startPage + 1
+
+    # Announce the creation of the highlights
+    @annotator.publish 'highlightsCreated', created
+
+  # Remove the highlights for the given set of pages
+  virtualize: (pageIndex) =>
+    highlight = @highlight[pageIndex]
+
+    return unless highlight? # No highlight for this page
+
+    highlight.removeFromDocument()
+
+    delete @highlight[pageIndex]
+
+    # Mark this anchor as not fully rendered
+    @fullyRealized = false
+
+    # Announce the removal of the highlight
+    @annotator.publish 'highlightRemoved', highlight
+
+  # Virtualize and remove an anchor from all involved pages
+  remove: ->
+    # Go over all the pages
+    for index in [@startPage .. @endPage]
+      @virtualize index
+      anchors = @annotator.anchors[index]
+      # Remove the anchor from the list
+      i = anchors.indexOf this
+      anchors[i..i] = []
+      # Kill the list if it's empty
+      delete @annotator.anchors[index] unless anchors.length
+
+  # This is called when the underlying Annotator has been udpated
+  annotationUpdated: ->
+    # Notify the highlights
+    for index in [@startPage .. @endPage]
+      @highlight[index]?.annotationUpdated()

h/static/scripts/annotator/class.coffee

+# Public: Delegator is the base class that all of Annotators objects inherit
+# from. It provides basic functionality such as instance options, event
+# delegation and pub/sub methods.
+class Delegator
+  # Public: Events object. This contains a key/pair hash of events/methods that
+  # should be bound. See Delegator#addEvents() for usage.
+  events: {}
+
+  # Public: Options object. Extended on initialisation.
+  options: {}
+
+  # A jQuery object wrapping the DOM Element provided on initialisation.
+  element: null
+
+  # Public: Constructor function that sets up the instance. Binds the @events
+  # hash and extends the @options object.
+  #
+  # element - The DOM element that this intance represents.
+  # options - An Object literal of options.
+  #
+  # Examples
+  #
+  #   element  = document.getElementById('my-element')
+  #   instance = new Delegator(element, {
+  #     option: 'my-option'
+  #   })
+  #
+  # Returns a new instance of Delegator.
+  constructor: (element, options) ->
+    @options = $.extend(true, {}, @options, options)
+    @element = $(element)
+
+    # Delegator creates closures for each event it binds. This is a private
+    # registry of created closures, used to enable event unbinding.
+    @_closures = {}
+
+    this.on = this.subscribe
+    this.addEvents()
+
+  # Public: binds the function names in the @events Object to their events.
+  #
+  # The @events Object should be a set of key/value pairs where the key is the
+  # event name with optional CSS selector. The value should be a String method
+  # name on the current class.
+  #
+  # This is called by the default Delegator constructor and so shouldn't usually
+  # need to be called by the user.
+  #
+  # Examples
+  #
+  #   # This will bind the clickedElement() method to the click event on @element.
+  #   @options = {"click": "clickedElement"}
+  #
+  #   # This will delegate the submitForm() method to the submit event on the
+  #   # form within the @element.
+  #   @options = {"form submit": "submitForm"}
+  #
+  #   # This will bind the updateAnnotationStore() method to the custom
+  #   # annotation:save event. NOTE: Because this is a custom event the
+  #   # Delegator#subscribe() method will be used and updateAnnotationStore()
+  #   # will not recieve an event parameter like the previous two examples.
+  #   @options = {"annotation:save": "updateAnnotationStore"}
+  #
+  # Returns nothing.
+  addEvents: ->
+    for event in Delegator._parseEvents(@events)
+      this._addEvent event.selector, event.event, event.functionName
+
+  # Public: unbinds functions previously bound to events by addEvents().
+  #
+  # The @events Object should be a set of key/value pairs where the key is the
+  # event name with optional CSS selector. The value should be a String method
+  # name on the current class.
+  #
+  # Returns nothing.
+  removeEvents: ->
+    for event in Delegator._parseEvents(@events)
+      this._removeEvent event.selector, event.event, event.functionName
+
+  # Binds an event to a callback function represented by a String. A selector
+  # can be provided in order to watch for events on a child element.
+  #
+  # The event can be any standard event supported by jQuery or a custom String.
+  # If a custom string is used the callback function will not recieve an
+  # event object as it's first parameter.
+  #
+  # selector     - Selector String matching child elements. (default: '')
+  # event        - The event to listen for.
+  # functionName - A String function name to bind to the event.
+  #
+  # Examples
+  #
+  #   # Listens for all click events on instance.element.
+  #   instance._addEvent('', 'click', 'onClick')
+  #
+  #   # Delegates the instance.onInputFocus() method to focus events on all
+  #   # form inputs within instance.element.
+  #   instance._addEvent('form :input', 'focus', 'onInputFocus')
+  #
+  # Returns itself.
+  _addEvent: (selector, event, functionName) ->
+    f = if typeof functionName is 'string'
+      this[functionName]
+    else
+      functionName
+    closure = => f.apply(this, arguments)
+
+    if selector == '' and Delegator._isCustomEvent(event)
+      this.subscribe(event, closure)
+    else
+      @element.delegate(selector, event, closure)
+
+    @_closures["#{selector}/#{event}/#{functionName}"] = closure
+
+    this
+
+  # Unbinds a function previously bound to an event by the _addEvent method.
+  #
+  # Takes the same arguments as _addEvent(), and an event will only be
+  # successfully unbound if the arguments to removeEvent() are exactly the same
+  # as the original arguments to _addEvent(). This would usually be called by
+  # _removeEvents().
+  #
+  # selector     - Selector String matching child elements. (default: '')
+  # event        - The event to listen for.
+  # functionName - A String function name to bind to the event.
+  #
+  # Returns itself.
+  _removeEvent: (selector, event, functionName) ->
+    closure = @_closures["#{selector}/#{event}/#{functionName}"]
+
+    if selector == '' and Delegator._isCustomEvent(event)
+      this.unsubscribe(event, closure)
+    else
+      @element.undelegate(selector, event, closure)
+
+    delete @_closures["#{selector}/#{event}/#{functionName}"]
+
+    this
+
+
+  # Public: Fires an event and calls all subscribed callbacks with any parameters
+  # provided. This is essentially an alias of @element.triggerHandler() but
+  # should be used to fire custom events.
+  #
+  # NOTE: Events fired using .publish() will not bubble up the DOM.
+  #
+  # event  - A String event name.
+  # params - An Array of parameters to provide to callbacks.
+  #
+  # Examples
+  #
+  #   instance.subscribe('annotation:save', (msg) -> console.log(msg))
+  #   instance.publish('annotation:save', ['Hello World'])
+  #   # => Outputs "Hello World"
+  #
+  # Returns itself.
+  publish: () ->
+    @element.triggerHandler.apply @element, arguments
+    this
+
+  # Public: Listens for custom event which when published will call the provided
+  # callback. This is essentially a wrapper around @element.bind() but removes
+  # the event parameter that jQuery event callbacks always recieve. These
+  # parameters are unnessecary for custom events.
+  #
+  # event    - A String event name.
+  # callback - A callback function called when the event is published.
+  #
+  # Examples
+  #
+  #   instance.subscribe('annotation:save', (msg) -> console.log(msg))
+  #   instance.publish('annotation:save', ['Hello World'])
+  #   # => Outputs "Hello World"
+  #
+  # Returns itself.
+  subscribe: (event, callback) ->
+    closure = -> callback.apply(this, [].slice.call(arguments, 1))
+
+    # Ensure both functions have the same unique id so that jQuery will accept
+    # callback when unbinding closure.
+    closure.guid = callback.guid = ($.guid += 1)
+
+    @element.bind event, closure
+    this
+
+  # Public: Unsubscribes a callback from an event. The callback will no longer
+  # be called when the event is published.
+  #
+  # event    - A String event name.
+  # callback - A callback function to be removed.
+  #
+  # Examples
+  #
+  #   callback = (msg) -> console.log(msg)
+  #   instance.subscribe('annotation:save', callback)
+  #   instance.publish('annotation:save', ['Hello World'])
+  #   # => Outputs "Hello World"
+  #
+  #   instance.unsubscribe('annotation:save', callback)
+  #   instance.publish('annotation:save', ['Hello Again'])
+  #   # => No output.
+  #
+  # Returns itself.
+  unsubscribe: ->
+    @element.unbind.apply @element, arguments
+    this
+
+
+# Parse the @events object of a Delegator into an array of objects containing
+# string-valued "selector", "event", and "func" keys.
+Delegator._parseEvents = (eventsObj) ->
+    events = []
+    for sel, functionName of eventsObj
+      [selector..., event] = sel.split ' '
+      events.push({
+        selector: selector.join(' '),
+        event: event,
+        functionName: functionName
+      })
+    return events
+
+
+# Native jQuery events that should recieve an event object. Plugins can
+# add their own methods to this if required.
+Delegator.natives = do ->
+  specials = (key for own key, val of jQuery.event.special)
+  """
+  blur focus focusin focusout load resize scroll unload click dblclick
+  mousedown mouseup mousemove mouseover mouseout mouseenter mouseleave
+  change select submit keydown keypress keyup error
+  """.split(/[^a-z]+/).concat(specials)
+
+
+# Checks to see if the provided event is a DOM event supported by jQuery or
+# a custom user event.
+#
+# event - String event name.
+#
+# Examples
+#
+#   Delegator._isCustomEvent('click')              # => false
+#   Delegator._isCustomEvent('mousedown')          # => false
+#   Delegator._isCustomEvent('annotation:created') # => true
+#
+# Returns true if event is a custom user event.
+Delegator._isCustomEvent = (event) ->
+  [event] = event.split('.')
+  $.inArray(event, Delegator.natives) == -1

h/static/scripts/annotator/console.coffee

+# Stub the console when not available so that everything still works.
+
+functions = [
+  "log", "debug", "info", "warn", "exception", "assert", "dir", "dirxml",
+  "trace", "group", "groupEnd", "groupCollapsed", "time", "timeEnd", "profile",
+  "profileEnd", "count", "clear", "table", "error", "notifyFirebug", "firebug",
+  "userObjects"
+]
+
+if console?
+  # Opera's console doesn't have a group function as of 2010-07-01
+  if not console.group?
+    console.group = (name) -> console.log "GROUP: ", name
+
+  # Webkit's developer console has yet to implement groupCollapsed as of 2010-07-01
+  if not console.groupCollapsed?
+    console.groupCollapsed = console.group
+
+  # Stub out any remaining functions
+  for fn in functions
+    if not console[fn]?
+      console[fn] = -> console.log _t("Not implemented:") + " console.#{name}"
+else
+  this.console = {}
+
+  for fn in functions
+    this.console[fn] = ->
+
+  this.console['error'] = (args...) ->
+    alert("ERROR: #{args.join(', ')}")
+
+  this.console['warn'] = (args...) ->
+    alert("WARNING: #{args.join(', ')}")

h/static/scripts/annotator/extensions.coffee

+# I18N
+gettext = null
+
+if Gettext?
+  _gettext = new Gettext(domain: "annotator")
+  gettext = (msgid) -> _gettext.gettext(msgid)
+else
+  gettext = (msgid) -> msgid
+
+_t = (msgid) -> gettext(msgid)
+
+unless jQuery?.fn?.jquery
+  console.error(_t("Annotator requires jQuery: have you included lib/vendor/jquery.js?"))
+
+unless JSON and JSON.parse and JSON.stringify
+  console.error(_t("Annotator requires a JSON implementation: have you included lib/vendor/json2.js?"))
+
+$ = jQuery
+
+Util = {}
+
+# Public: Flatten a nested array structure
+#
+# Returns an array
+Util.flatten = (array) ->
+  flatten = (ary) ->
+    flat = []
+
+    for el in ary
+      flat = flat.concat(if el and $.isArray(el) then flatten(el) else el)
+
+    return flat
+
+  flatten(array)
+
+# Public: Finds all text nodes within the elements in the current collection.
+#
+# Returns a new jQuery collection of text nodes.
+Util.getTextNodes = (jq) ->
+  getTextNodes = (node) ->
+    if node and node.nodeType != Node.TEXT_NODE
+      nodes = []
+
+      # If not a comment then traverse children collecting text nodes.
+      # We traverse the child nodes manually rather than using the .childNodes
+      # property because IE9 does not update the .childNodes property after
+      # .splitText() is called on a child text node.
+      if node.nodeType != Node.COMMENT_NODE
+        # Start at the last child and walk backwards through siblings.
+        node = node.lastChild
+        while node
+          nodes.push getTextNodes(node)
+          node = node.previousSibling
+
+      # Finally reverse the array so that nodes are in the correct order.
+      return nodes.reverse()
+    else
+      return node
+
+  jq.map -> Util.flatten(getTextNodes(this))
+
+# Public: determine the last text node inside or before the given node
+Util.getLastTextNodeUpTo = (n) ->
+  switch n.nodeType
+    when Node.TEXT_NODE
+      return n # We have found our text node.
+    when Node.ELEMENT_NODE
+      # This is an element, we need to dig in
+      if n.lastChild? # Does it have children at all?
+        result = Util.getLastTextNodeUpTo n.lastChild
+        if result? then return result
+    else
+      # Not a text node, and not an element node.
+  # Could not find a text node in current node, go backwards
+  n = n.previousSibling
+  if n?
+    Util.getLastTextNodeUpTo n
+  else
+    null
+
+# Public: determine the first text node in or after the given jQuery node.
+Util.getFirstTextNodeNotBefore = (n) ->
+  switch n.nodeType
+    when Node.TEXT_NODE
+      return n # We have found our text node.
+    when Node.ELEMENT_NODE
+      # This is an element, we need to dig in
+      if n.firstChild? # Does it have children at all?
+        result = Util.getFirstTextNodeNotBefore n.firstChild
+        if result? then return result
+    else
+      # Not a text or an element node.
+  # Could not find a text node in current node, go forward
+  n = n.nextSibling
+  if n?
+    Util.getFirstTextNodeNotBefore n
+  else
+    null
+
+Util.xpathFromNode = (el, relativeRoot) ->
+  try
+    result = simpleXPathJQuery.call el, relativeRoot
+  catch exception
+    console.log "jQuery-based XPath construction failed! Falling back to manual."
+    result = simpleXPathPure.call el, relativeRoot
+  result
+
+Util.nodeFromXPath = (xp, root) ->
+  steps = xp.substring(1).split("/")
+  node = root
+  for step in steps
+    [name, idx] = step.split "["
+    idx = if idx? then parseInt (idx?.split "]")[0] else 1
+    node = findChild node, name.toLowerCase(), idx
+
+  node
+
+Util.escape = (html) ->
+  html
+    .replace(/&(?!\w+;)/g, '&')
+    .replace(/</g, '&lt;')
+    .replace(/>/g, '&gt;')
+    .replace(/"/g, '&quot;')

h/static/scripts/annotator/highlights.coffee

+# Abstract highlight class
+class Highlight
+
+  constructor: (@anchor, @pageIndex) ->
+    @annotator = @anchor.annotator
+    @annotation = @anchor.annotation
+
+  # Mark/unmark this hl as temporary (while creating an annotation)
+  setTemporary: (value) ->
+    throw "Operation not implemented."
+
+  # Is this a temporary hl?
+  isTemporary: ->
+    throw "Operation not implemented."
+
+  # TODO: review the usage of the batch parameters.
+
+  # Mark/unmark this hl as focused
+  #
+  # Value specifies whether it should be focused or not
+  #
+  # The 'batch' field specifies whether this call is only one of
+  # many subsequent calls, which should be executed together.
+  #
+  # In this case, a "finalizeHighlights" event will be published
+  # when all the flags have been set, and the changes should be
+  # executed.
+  setFocused: (value, batch = false) ->
+    throw "Operation not implemented."
+
+  # React to changes in the underlying annotation
+  annotationUpdated: ->
+    #console.log "In HL", this, "annotation has been updated."
+
+  # Remove all traces of this hl from the document
+  removeFromDocument: ->
+    throw "Operation not implemented."
+
+  # Get the HTML elements making up the highlight
+  # If you implement this, you get automatic implementation for the functions
+  # below. However, if you need a more sophisticated control mechanism,
+  # you are free to leave this unimplemented, and manually implement the
+  # rest.
+  _getDOMElements: ->
+    throw "Operation not implemented."
+
+  # Get the Y offset of the highlight. Override for more control
+  getTop: -> $(@_getDOMElements()).offset().top
+
+  # Get the height of the highlight. Override for more control
+  getHeight: -> $(@_getDOMElements()).outerHeight true
+
+  # Get the bottom Y offset of the highlight. Override for more control.
+  getBottom: -> @getTop() + @getBottom()
+
+  # Scroll the highlight into view. Override for more control
+  scrollTo: -> $(@_getDOMElements()).scrollintoview()
+
+  # Scroll the highlight into view, with a comfortable margin.
+  # up should be true if we need to scroll up; false otherwise
+  paddedScrollTo: (direction) ->
+    unless direction? then throw "Direction is required"
+    dir = if direction is "up" then -1 else +1
+    where = $(@_getDOMElements())
+    wrapper = @annotator.wrapper
+    defaultView = wrapper[0].ownerDocument.defaultView
+    pad = defaultView.innerHeight * .2
+    where.scrollintoview
+      complete: ->
+        scrollable = if this.parentNode is this.ownerDocument
+          $(this.ownerDocument.body)
+        else
+          $(this)
+        top = scrollable.scrollTop()
+        correction = pad * dir
+        scrollable.stop().animate {scrollTop: top + correction}, 300
+
+  # Scroll up to the highlight, with a comfortable margin.
+  paddedScrollUpTo: -> @paddedScrollTo "up"
+
+  # Scroll down to the highlight, with a comfortable margin.
+  paddedScrollDownTo: -> @paddedScrollTo "down"

h/static/scripts/annotator/notification.coffee

+Annotator = Annotator || {}
+
+# Public: A simple notification system that can be used to display information,
+# warnings and errors to the user. Display of notifications are controlled
+# cmpletely by CSS by adding/removing the @options.classes.show class. This
+# allows styling/animation using CSS rather than hardcoding styles.
+class Annotator.Notification extends Delegator
+
+  # Sets events to be bound to the @element.
+  events:
+    "click": "hide"
+
+  # Default options.
+  options:
+    html: "<div class='annotator-notice'></div>"
+    classes:
+      show:    "annotator-notice-show"
+      info:    "annotator-notice-info"
+      success: "annotator-notice-success"
+      error:   "annotator-notice-error"
+
+  # Public: Creates an instance of  Notification and appends it to the
+  # document body.
+  #
+  # options - The following options can be provided.
+  #           classes - A Object literal of classes used to determine state.
+  #           html    - An HTML string used to create the notification.
+  #
+  # Examples
+  #
+  #   # Displays a notification with the text "Hello World"
+  #   notification = new Annotator.Notification
+  #   notification.show("Hello World")
+  #
+  # Returns
+  constructor: (options) ->
+    super $(@options.html).appendTo(document.body)[0], options
+
+  # Public: Displays the annotation with message and optional status. The
+  # message will hide itself after 5 seconds or if the user clicks on it.
+  #
+  # message - A message String to display (HTML will be escaped).
+  # status  - A status constant. This will apply a class to the element for
+  #           styling. (default: Annotator.Notification.INFO)
+  #
+  # Examples
+  #
+  #   # Displays a notification with the text "Hello World"
+  #   notification.show("Hello World")
+  #
+  #   # Displays a notification with the text "An error has occurred"
+  #   notification.show("An error has occurred", Annotator.Notification.ERROR)
+  #
+  # Returns itself.
+  show: (message, status=Annotator.Notification.INFO) =>
+    @currentStatus = status
+    $(@element)
+      .addClass(@options.classes.show)
+      .addClass(@options.classes[@currentStatus])
+      .html(Util.escape(message || ""))
+
+    setTimeout this.hide, 5000
+    this
+
+  # Public: Hides the notification.
+  #
+  # Examples
+  #
+  #   # Hides the notification.
+  #   notification.hide()
+  #
+  # Returns itself.
+  hide: =>
+    @currentStatus ?= Annotator.Notification.INFO
+    $(@element)
+      .removeClass(@options.classes.show)
+      .removeClass(@options.classes[@currentStatus])
+    this
+
+# Constants for controlling the display of the notification. Each constant
+# adds a different class to the Notification#element.
+Annotator.Notification.INFO    = 'show'
+Annotator.Notification.SUCCESS = 'success'
+Annotator.Notification.ERROR   = 'error'
+
+# Attach notification methods to the Annotation object on document ready.
+$(->
+  notification = new Annotator.Notification
+
+  Annotator.showNotification = notification.show
+  Annotator.hideNotification = notification.hide
+)

h/static/scripts/annotator/plugin/auth.coffee

+# Public: Creates a Date object from an ISO8601 formatted date String.
+#
+# string - ISO8601 formatted date String.
+#
+# Returns Date instance.
+createDateFromISO8601 = (string) ->
+  regexp = "([0-9]{4})(-([0-9]{2})(-([0-9]{2})" +
+           "(T([0-9]{2}):([0-9]{2})(:([0-9]{2})(\.([0-9]+))?)?" +
+           "(Z|(([-+])([0-9]{2}):([0-9]{2})))?)?)?)?"
+
+  d = string.match(new RegExp(regexp))
+
+  offset = 0
+  date = new Date(d[1], 0, 1)
+
+  date.setMonth(d[3] - 1) if d[3]
+  date.setDate(d[5]) if d[5]
+  date.setHours(d[7]) if d[7]
+  date.setMinutes(d[8]) if d[8]
+  date.setSeconds(d[10]) if d[10]
+  date.setMilliseconds(Number("0." + d[12]) * 1000) if d[12]
+
+  if d[14]
+    offset = (Number(d[16]) * 60) + Number(d[17])
+    offset *= ((d[15] == '-') ? 1 : -1)
+
+  offset -= date.getTimezoneOffset()
+  time = (Number(date) + (offset * 60 * 1000))
+
+  date.setTime(Number(time))
+  date
+
+base64Decode = (data) ->
+  if atob?
+    # Gecko and Webkit provide native code for this
+    atob(data)
+  else
+    # Adapted from MIT/BSD licensed code at http://phpjs.org/functions/base64_decode
+    # version 1109.2015
+    b64 = "ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz0123456789+/="
+    i = 0
+    ac = 0
+    dec = ""
+    tmp_arr = []
+
+    if not data
+      return data
+
+    data += ''
+
+    while i < data.length
+      # unpack four hexets into three octets using index points in b64
+      h1 = b64.indexOf(data.charAt(i++))
+      h2 = b64.indexOf(data.charAt(i++))
+      h3 = b64.indexOf(data.charAt(i++))
+      h4 = b64.indexOf(data.charAt(i++))
+
+      bits = h1 << 18 | h2 << 12 | h3 << 6 | h4
+
+      o1 = bits >> 16 & 0xff
+      o2 = bits >> 8 & 0xff
+      o3 = bits & 0xff
+
+      if h3 == 64
+        tmp_arr[ac++] = String.fromCharCode(o1)
+      else if h4 == 64
+        tmp_arr[ac++] = String.fromCharCode(o1, o2)
+      else
+        tmp_arr[ac++] = String.fromCharCode(o1, o2, o3)
+
+    tmp_arr.join('')
+
+base64UrlDecode = (data) ->
+  m = data.length % 4
+  if m != 0
+    for i in [0...4 - m]
+      data += '='
+  data = data.replace(/-/g, '+')
+  data = data.replace(/_/g, '/')
+  base64Decode(data)
+
+parseToken = (token) ->
+  [head, payload, sig] = token.split('.')
+  JSON.parse(base64UrlDecode(payload))
+
+# Public: Supports the Store plugin by providing Authentication headers.
+class Annotator.Plugin.Auth extends Annotator.Plugin
+  # User options that can be provided.
+  options:
+
+    # An authentication token. Used to skip the request to the server for a
+    # a token.
+    token: null
+
+    # The URL on the local server to request an authentication token.
+    tokenUrl: '/auth/token'
+
+    # If true will try and fetch a token when the plugin is initialised.
+    autoFetch: true
+
+  # Public: Create a new instance of the Auth plugin.
+  #
+  # element - The element to bind all events to. Usually the Annotator#element.
+  # options - An Object literal containing user options.
+  #
+  # Examples
+  #
+  #   plugin = new Annotator.Plugin.Auth(annotator.element, {
+  #     tokenUrl: '/my/custom/path'
+  #   })
+  #
+  # Returns instance of Auth.
+  constructor: (element, options) ->
+    super
+
+    # List of functions to be executed when we have a valid token.
+    @waitingForToken = []
+
+    if @options.token
+      this.setToken(@options.token)
+    else
+      this.requestToken()
+
+  # Public: Makes a request to the local server for an authentication token.
+  #
+  # Examples
+  #
+  #   auth.requestToken()
+  #
+  # Returns jqXHR object.
+  requestToken: ->
+    @requestInProgress = true
+
+    $.ajax
+      url: @options.tokenUrl
+      dataType: 'text'
+      xhrFields:
+        withCredentials: true # Send any auth cookies to the backend
+
+    # on success, set the auth token
+    .done (data, status, xhr) =>
+      this.setToken(data)
+
+    # on failure, relay any message given by the server to the user with a notification
+    .fail (xhr, status, err) =>
+      msg = Annotator._t("Couldn't get auth token:")
+      console.error "#{msg} #{err}", xhr
+      Annotator.showNotification("#{msg} #{xhr.responseText}", Annotator.Notification.ERROR)
+
+    # always reset the requestInProgress indicator
+    .always =>
+      @requestInProgress = false
+
+  # Public: Sets the @token and checks it's validity. If the token is invalid
+  # requests a new one from the server.
+  #
+  # token - A token string.
+  #
+  # Examples
+  #
+  #   auth.setToken('eyJh...9jQ3I')
+  #
+  # Returns nothing.
+  setToken: (token) ->
+    @token = token
+    # Parse the token without verifying its authenticity:
+    @_unsafeToken = parseToken(token)
+
+    if this.haveValidToken()
+      if @options.autoFetch
+        # Set timeout to fetch new token 2 seconds before current token expiry
+        @refreshTimeout = setTimeout (() => this.requestToken()), (this.timeToExpiry() - 2) * 1000
+
+      # Set headers field on this.element
+      this.updateHeaders()
+
+      # Run callbacks waiting for token
+      while @waitingForToken.length > 0
+        @waitingForToken.pop()(@_unsafeToken)
+
+    else
+      console.warn Annotator._t("Didn't get a valid token.")
+      if @options.autoFetch
+        console.warn Annotator._t("Getting a new token in 10s.")
+        setTimeout (() => this.requestToken()), 10 * 1000
+
+  # Public: Checks the validity of the current token. Note that this *does
+  # not* check the authenticity of the token.
+  #
+  # Examples
+  #
+  #   auth.haveValidToken() # => Returns true if valid.
+  #
+  # Returns true if the token is valid.
+  haveValidToken: () ->
+    allFields = @_unsafeToken &&
+                @_unsafeToken.issuedAt &&
+                @_unsafeToken.ttl &&
+                @_unsafeToken.consumerKey
+
+    if allFields && this.timeToExpiry() > 0
+      return true
+    else
+      return false
+
+  # Public: Calculates the time in seconds until the current token expires.
+  #
+  # Returns Number of seconds until token expires.
+  timeToExpiry: ->
+    now = new Date().getTime() / 1000
+    issue = createDateFromISO8601(@_unsafeToken.issuedAt).getTime() / 1000
+
+    expiry = issue + @_unsafeToken.ttl
+    timeToExpiry = expiry - now
+
+    if (timeToExpiry > 0) then timeToExpiry else 0
+
+  # Public: Updates the headers to be sent with the Store requests. This is
+  # achieved by updating the 'annotator:headers' key in the @element.data()
+  # store.
+  #
+  # Returns nothing.
+  updateHeaders: ->
+    current = @element.data('annotator:headers')
+    @element.data('annotator:headers', $.extend(current, {
+      'x-annotator-auth-token': @token,
+    }))
+
+  # Runs the provided callback if a valid token is available. Otherwise requests
+  # a token until it recieves a valid one.
+  #
+  # callback - A callback function to call once a valid token is obtained.
+  #
+  # Examples
+  #
+  #   auth.withToken ->
+  #     store.loadAnnotations()
+  #
+  # Returns nothing.
+  withToken: (callback) ->
+    if not callback?
+      return
+
+    if this.haveValidToken()
+      callback(@_unsafeToken)
+    else
+      this.waitingForToken.push(callback)
+      if not @requestInProgress
+        this.requestToken()

h/static/scripts/annotator/plugin/document.coffee

+class Annotator.Plugin.Document extends Annotator.Plugin
+
+  $ = Annotator.$
+
+  events:
+    'beforeAnnotationCreated': 'beforeAnnotationCreated'
+
+  pluginInit: ->
+    this.getDocumentMetadata()
+
+  # returns the primary URI for the document being annotated
+
+  uri: =>
+    uri = decodeURIComponent document.location.href
+    for link in @metadata.link
+      if link.rel == "canonical"
+        uri = link.href
+    return uri
+
+  # returns all uris for the document being annotated
+
+  uris: =>
+    uniqueUrls = {}
+    for link in @metadata.link
+      uniqueUrls[link.href] = true if link.href
+    return (href for href of uniqueUrls)
+
+  beforeAnnotationCreated: (annotation) =>
+    annotation.document = @metadata
+
+  getDocumentMetadata: =>
+    @metadata = {}
+
+    # first look for some common metadata types
+    # TODO: look for microdata/rdfa?
+    this._getHighwire()
+    this._getDublinCore()
+    this._getFacebook()
+    this._getEprints()
+    this._getPrism()
+    this._getTwitter()
+    this._getFavicon()
+    this._getDocOwners()
+
+    # extract out/normalize some things
+    this._getTitle()
+    this._getLinks()
+
+    return @metadata
+
+  _getHighwire: =>
+    return @metadata.highwire = this._getMetaTags("citation", "name", "_")
+
+  _getFacebook: =>
+    return @metadata.facebook = this._getMetaTags("og", "property", ":")
+
+  _getTwitter: =>
+    return @metadata.twitter = this._getMetaTags("twitter", "name", ":")
+
+  _getDublinCore: =>
+    return @metadata.dc = this._getMetaTags("dc", "name", ".")
+
+  _getPrism: =>
+    return @metadata.prism = this._getMetaTags("prism", "name", ".")
+
+  _getEprints: =>
+    return @metadata.eprints = this._getMetaTags("eprints", "name", ".")
+
+  _getMetaTags: (prefix, attribute, delimiter) =>
+    tags = {}
+    for meta in $("meta")
+      name = $(meta).attr(attribute)
+      content = $(meta).prop("content")
+      if name
+        match = name.match(RegExp("^#{prefix}#{delimiter}(.+)$", "i"))
+        if match
+          n = match[1]
+          if tags[n]
+            tags[n].push(content)
+          else
+            tags[n] = [content]
+    return tags
+
+  _getTitle: =>
+    if @metadata.highwire.title
+      @metadata.title = @metadata.highwire.title[0]
+    else if @metadata.eprints.title
+      @metadata.title = @metadata.eprints.title
+    else if @metadata.prism.title
+      @metadata.title = @metadata.prism.title
+    else if @metadata.facebook.title
+      @metadata.title = @metadata.facebook.title
+    else if @metadata.twitter.title
+      @metadata.title = @metadata.twitter.title
+    else if @metadata.dc.title
+      @metadata.title = @metadata.dc.title
+    else
+      @metadata.title = $("head title").text()
+
+  _getLinks: =>
+    # we know our current location is a link for the document
+    @metadata.link = [href: document.location.href]
+
+    # look for some relevant link relations
+    for link in $("link")
+      l = $(link)
+      href = this._absoluteUrl(l.prop('href')) # get absolute url
+      rel = l.prop('rel')
+      type = l.prop('type')
+      relTypes = ["alternate", "canonical", "bookmark", "shortlink"]
+      dropTypes = ["application/rss+xml", "application/atom+xml"]
+      if rel in relTypes and type not in dropTypes
+        @metadata.link.push(href: href, rel: rel, type: type)
+
+    # look for links in scholar metadata
+    for name, values of @metadata.highwire
+
+      if name == "pdf_url"
+        for url in values
+          @metadata.link.push
+            href: this._absoluteUrl(url)
+            type: "application/pdf"
+
+      # kind of a hack to express DOI identifiers as links but it's a
+      # convenient place to look them up later, and somewhat sane since
+      # they don't have a type
+
+      if name == "doi"
+        for doi in values
+          if doi[0..3] != "doi:"
+            doi = "doi:" + doi
+          @metadata.link.push(href: doi)
+
+    # look for links in dublincore data
+    for name, values of @metadata.dc
+      if name == "identifier"
+        for id in values
+          if id[0..3] == "doi:"
+            @metadata.link.push(href: id)
+
+  _getFavicon: =>
+    for link in $("link")
+      if $(link).prop("rel") in ["shortcut icon", "icon"]
+        @metadata["favicon"] = this._absoluteUrl(link.href)
+
+  _getDocOwners: =>
+    @metadata.reply_to = []
+
+    for a in $("a")
+      if a.rel is 'reply-to'
+        if a.href.toLowerCase().slice(0,7) is "mailto:"
+          @metadata.reply_to.push a.href[7..]
+        else
+          @metadata.reply_to.push a.href
+
+  # hack to get a absolute url from a possibly relative one
+  _absoluteUrl: (url) ->
+    d = document.createElement('a')
+    d.href = url
+    d.href

h/static/scripts/annotator/plugin/domtextmapper.coffee

+# Annotator plugin providing dom-text-mapper
+class Annotator.Plugin.DomTextMapper extends Annotator.Plugin
+
+  pluginInit: ->
+    if @options.skip
+      console.log "Not registering DOM-Text-Mapper."
+      return
+
+    @annotator.documentAccessStrategies.unshift
+      # Document access strategy for simple HTML documents,
+      # with enhanced text extraction and mapping features.
+      name: "DOM-Text-Mapper"
+      mapper: window.DomTextMapper
+      init: => @annotator.domMapper.setRootNode @annotator.wrapper[0]

h/static/scripts/annotator/plugin/fuzzytextanchors.coffee

+# Annotator plugin for fuzzy text matching
+class Annotator.Plugin.FuzzyTextAnchors extends Annotator.Plugin
+
+  pluginInit: ->
+    # Do we have the basic text anchors plugin loaded?
+    unless @annotator.plugins.TextAnchors
+      console.warn "The FuzzyTextAnchors Annotator plugin requires the TextAnchors plugin. Skipping."
+      return
+
+    @Annotator = Annotator
+
+    # Initialize the text matcher library
+    @textFinder = new DomTextMatcher => @annotator.domMapper.getCorpus()
+
+    # Register our fuzzy strategies
+    @annotator.anchoringStrategies.push
+      # Two-phased fuzzy text matching strategy. (Using context and quote.)
+      # This can handle document structure changes,
+      # and also content changes.
+      name: "two-phase fuzzy"
+      code: this.twoPhaseFuzzyMatching
+
+    @annotator.anchoringStrategies.push
+      # Naive fuzzy text matching strategy. (Using only the quote.)
+      # This can handle document structure changes,
+      # and also content changes.
+      name: "one-phase fuzzy"
+      code: this.fuzzyMatching
+
+  twoPhaseFuzzyMatching: (annotation, target) =>
+    # This won't work without DTM
+    return unless @annotator.domMapper.getInfoForNode?
+
+    # Fetch the quote and the context
+    quoteSelector = @annotator.findSelector target.selector, "TextQuoteSelector"
+    prefix = quoteSelector?.prefix
+    suffix = quoteSelector?.suffix
+    quote = quoteSelector?.exact
+
+    # No context, to joy
+    unless (prefix? and suffix?) then return null
+
+    # Fetch the expected start and end positions
+    posSelector = @annotator.findSelector target.selector, "TextPositionSelector"
+    expectedStart = posSelector?.start
+    expectedEnd = posSelector?.end
+
+    options =
+      contextMatchDistance: @annotator.domMapper.getCorpus().length * 2
+      contextMatchThreshold: 0.5
+      patternMatchThreshold: 0.5
+      flexContext: true
+    result = @textFinder.searchFuzzyWithContext prefix, suffix, quote,
+      expectedStart, expectedEnd, false, options
+
+    # If we did not got a result, give up
+    unless result.matches.length
+ #     console.log "Fuzzy matching did not return any results. Giving up on two-phase strategy."
+      return null
+
+    # here is our result
+    match = result.matches[0]
+#    console.log "2-phase fuzzy found match at: [" + match.start + ":" +
+#      match.end + "]: '" + match.found + "' (exact: " + match.exact + ")"
+
+    # OK, we have everything
+    # Create a TextPositionAnchor from this data
+    new @Annotator.TextPositionAnchor @annotator, annotation, target,
+      match.start, match.end,
+      (@annotator.domMapper.getPageIndexForPos match.start),
+      (@annotator.domMapper.getPageIndexForPos match.end),
+      match.found,
+      unless match.exact then match.comparison.diffHTML,
+      unless match.exact then match.exactExceptCase
+
+  fuzzyMatching: (annotation, target) =>
+    # This won't work without DTM
+    return unless @annotator.domMapper.getInfoForNode?
+
+    # Fetch the quote
+    quoteSelector = @annotator.findSelector target.selector, "TextQuoteSelector"
+    quote = quoteSelector?.exact
+
+    # No quote, no joy
+    unless quote? then return null
+
+    # For too short quotes, this strategy is bound to return false positives.
+    # See https://github.com/hypothesis/h/issues/853 for details.
+    return unless quote.length >= 32
+
+    # Get a starting position for the search
+    posSelector = @annotator.findSelector target.selector, "TextPositionSelector"
+    expectedStart = posSelector?.start
+
+    # Get full document length
+    len = @annotator.domMapper.getCorpus().length
+
+    # If we don't have the position saved, start at the middle of the doc
+    expectedStart ?= Math.floor(len / 2)
+
+    # Do the fuzzy search
+    options =
+      matchDistance: len * 2
+      withFuzzyComparison: true
+    result = @textFinder.searchFuzzy quote, expectedStart, false, options
+
+    # If we did not got a result, give up
+    unless result.matches.length
+#      console.log "Fuzzy matching did not return any results. Giving up on one-phase strategy."
+      return null
+
+    # here is our result
+    match = result.matches[0]
+#    console.log "1-phase fuzzy found match at: [" + match.start + ":" +
+#      match.end + "]: '" + match.found + "' (exact: " + match.exact + ")"
+
+    # OK, we have everything
+    # Create a TextPosutionAnchor from this data
+    new @Annotator.TextPositionAnchor @annotator, annotation, target,
+      match.start, match.end,
+      (@annotator.domMapper.getPageIndexForPos match.start),
+      (@annotator.domMapper.getPageIndexForPos match.end),
+      match.found,
+      unless match.exact then match.comparison.diffHTML,
+      unless match.exact then match.exactExceptCase

h/static/scripts/annotator/plugin/pdf.coffee

+detectedPDFjsVersion = PDFJS?.version.split(".").map parseFloat
+
+# Compare two versions, given as arrays of numbers
+compareVersions = (v1, v2) ->
+  unless Array.isArray(v1) and Array.isArray(v2)
+    throw new Error "Expecting arrays, in the form of [1, 0, 123]"
+  unless v1.length is v2.length
+    throw new Error "Can't compare versions in different formats."
+  for i in [0 ... v1.length]
+    if v1[i] < v2[i]
+      return -1
+    else if v1[i] > v2[i]
+      return 1
+  # Finished comparing, it's the same all along
+  return 0
+
+# Document mapper module for PDF.js documents
+class window.PDFTextMapper extends PageTextMapperCore
+
+  # Are we working with a PDF document?
+  @isPDFDocument: ->
+    PDFView? or             # for PDF.js up to v1.0.712
+      PDFViewerApplication? # for PDF.js v1.0.907 and up
+
+  # Can we use this document access strategy?
+  @applicable: -> @isPDFDocument()
+
+  requiresSmartStringPadding: true
+
+  # Get the number of pages
+  getPageCount: -> @_viewer.pages.length
+
+  # Where are we in the document?
+  getPageIndex: -> @_app.page - 1
+
+  # Jump to a given page
+  setPageIndex: (index) -> @_app.page = index + 1
+
+  # Determine whether a given page has been rendered
+  _isPageRendered: (index) ->
+    @_viewer.pages[index]?.textLayer?.renderingDone
+
+  # Get the root DOM node of a given page
+  getRootNodeForPage: (index) ->
+    @_viewer.pages[index].textLayer.textLayerDiv
+
+  constructor: ->
+    # Set references to objects that moved around in different versions
+    # of PDF.js, and define a few methods accordingly
+    if PDFViewerApplication?
+      @_app = PDFViewerApplication
+      @_viewer = @_app.pdfViewer
+      @_tryExtractPage = (index) => @_viewer.getPageTextContent(index)
+    else
+      @_app = @_viewer = PDFView
+      @_finder = @_app.findController ? # PDF.js v1.0.712
+        PDFFindController               # up to PDF.js v1.0.437
+      @_tryExtractPage = (index) =>
+        new Promise (resolve, reject) =>
+          tryIt = =>
+            page = @_finder.pdfPageSource.pages[index]
+            if page?.pdfPage?
+              page.getTextContent().then(resolve)
+            else
+              setTimeout tryIt, 100
+          tryIt()
+
+    @setEvents()
+
+    # Starting with PDF.js v1.0.822, the CSS rules changed.
+    #
+    # See this commit:
+    # https://github.com/mozilla/pdf.js/commit/a2e8a5ee7fecdbb2f42eeeb2343faa38cd553a15
+    # We need to know about that, and set our own CSS rules accordingly,
+    # so that our highlights are still visible. So we add a marker class,
+    # if this is the case.
+    if compareVersions(detectedPDFjsVersion, [1, 0, 822]) >= 0
+      @_viewer.container.className += " has-transparent-text-layer"
+
+  # Install watchers for various events to detect page rendering/unrendering
+  setEvents: ->
+    # Detect page rendering
+    addEventListener "pagerender", (evt) =>
+
+      # If we have not yet finished the initial scanning, then we are
+      # not interested.
+      return unless @pageInfo?
+
+      index = evt.detail.pageNumber - 1
+      @_onPageRendered index
+
+    # Detect page un-rendering
+    addEventListener "DOMNodeRemoved", (evt) =>
+      node = evt.target
+      if node.nodeType is Node.ELEMENT_NODE and node.nodeName.toLowerCase() is "div" and node.className is "textLayer"
+        index = parseInt node.parentNode.id.substr(13) - 1
+
+        # Forget info about the new DOM subtree
+        @_unmapPage @pageInfo[index]
+
+    # Do something about cross-page selections
+    viewer = document.getElementById "viewer"
+    viewer.addEventListener "domChange", (event) =>
+      node = event.srcElement ? event.target
+      data = event.data
+      if "viewer" is node.getAttribute? "id"
+        console.log "Detected cross-page change event."
+        # This event escaped the pages.
+        # Must be a cross-page selection.
+        if data.start? and data.end?
+          startPage = @getPageForNode data.start
+          @_updateMap @pageInfo[startPage.index]
+          endPage = @getPageForNode data.end
+          @_updateMap @pageInfo[endPage.index]
+
+    @_viewer.container.addEventListener "scroll", @_onScroll
+
+  _extractionPattern: /[ ]+/g
+  _parseExtractedText: (text) => text.replace @_extractionPattern, " "
+
+  # Wait for PDF.js to initialize
+  waitForInit: ->
+    # Create a utility function to poll status
+    tryIt = (resolve) =>
+      # Are we ready yet?
+      if @_app.documentFingerprint and @_app.documentInfo
+        # Now we have PDF metadata."
+        resolve()
+      else
+        # PDF metadata is not yet available; postponing extraction.
+        setTimeout ( =>
+          # let's try again if we have PDF metadata.
+          tryIt resolve
+        ), 100
+
+    # Return a promise
+    new Promise (resolve, reject) =>
+      if PDFTextMapper.applicable()
+        tryIt resolve
+      else
+        reject "Not a PDF.js document"
+
+  # Extract the text from the PDF
+  scan: ->
+    # Return a promise
+    new Promise (resolve, reject) =>
+      @_pendingScanResolve = resolve
+      @waitForInit().then =>
+
+        # Wait for the document to load
+        @_app.pdfDocument.getPage(1).then =>
+          @pageInfo = []
+          @_extractPageText 0
+
+  # Manually extract the text from the PDF document.
+  # This workaround is here to avoid depending PDFFindController's
+  # own text extraction routines, which sometimes fail to add
+  # adequate spacing.
+  _extractPageText: (pageIndex) ->
+    @_tryExtractPage(pageIndex).then (data) =>
+
+      # There is some variation about what I might find here,
+      # depending on PDF.js version, so we need to do some guesswork.
+      textData = data.bidiTexts ? data.items ? data
+
+      # First, join all the pieces from the bidiTexts
+      rawContent = (text.str for text in textData).join " "
+
+      # Do some post-processing
+      content = @_parseExtractedText rawContent
+
+      # Save the extracted content to our page information registery
+      @pageInfo[pageIndex] =
+        index: pageIndex
+        content: content
+
+      if pageIndex is @getPageCount() - 1
+        @_finishScan()
+      else
+        @_extractPageText pageIndex + 1
+
+  # This is called when scanning is finished
+  _finishScan: =>
+    # Do some besic calculations with the content
+    @_onHavePageContents()
+
+    # OK, we are ready to rock.
+    @_pendingScanResolve()
+
+    # Do whatever we need to do after scanning
+    @_onAfterScan()
+
+
+  # Look up the page for a given DOM node
+  getPageForNode: (node) ->
+    # Search for the root of this page
+    div = node
+    while (
+      (div.nodeType isnt Node.ELEMENT_NODE) or
+      not div.getAttribute("class")? or
+      (div.getAttribute("class") isnt "textLayer")
+    )
+      div = div.parentNode
+
+    # Fetch the page number from the id. ("pageContainerN")
+    index = parseInt div.parentNode.id.substr(13) - 1
+
+    # Look up the page
+    @pageInfo[index]
+
+  getDocumentFingerprint: -> @_app.documentFingerprint
+  getDocumentInfo: -> @_app.documentInfo
+
+# Annotator plugin for annotating documents handled by PDF.js
+class Annotator.Plugin.PDF extends Annotator.Plugin
+
+  $ = Annotator.$
+
+  pluginInit: ->
+    # We need dom-text-mapper
+    unless @annotator.plugins.DomTextMapper
+      console.warn "The PDF Annotator plugin requires the DomTextMapper plugin. Skipping."
+      return
+
+    @annotator.documentAccessStrategies.unshift
+      # Strategy to handle PDF documents rendered by PDF.js
+      name: "PDF.js"
+      mapper: PDFTextMapper
+
+  # Are we looking at a PDF.js-rendered document?
+  _isPDF: -> PDFTextMapper.applicable()
+
+  # Extract the URL of the PDF file, maybe from the chrome-extension URL
+  _getDocumentURI: ->
+    uri = window.location.href
+
+    # We might have the URI embedded in a chrome-extension URI
+    matches = uri.match('chrome-extension://[a-z]{32}/(content/web/viewer.html\\?file=)?(.*)')
+
+    # Get the last match
+    match = matches?[matches.length - 1]
+
+    if match
+      decodeURIComponent match
+    else
+      uri
+
+  # Get a PDF fingerPrint-based URI
+  _getFingerPrintURI: ->
+    fingerprint = @annotator.domMapper.getDocumentFingerprint()
+
+    # This is an experimental URN,
+    # as per http://tools.ietf.org/html/rfc3406#section-3.0
+    "urn:x-pdf:" + fingerprint
+
+  # Public: get a canonical URI, if this is a PDF. (Null otherwise)
+  uri: ->
+    return null unless @_isPDF()
+
+    # For now, we return the fingerprint-based URI first,
+    # because it's probably more relevant.
+    # OTOH, we can't use it for clickable source links ...
+    # but the path is also included in the matadata,
+    # so anybody who _needs_ that can access it from there.
+    @_getFingerPrintURI()
+
+  # Try to extract the title; first from metadata, then HTML header
+  _getTitle: ->
+    title = @annotator.domMapper.getDocumentInfo().Title?.trim()
+    if title? and title isnt ""
+      title
+    else
+      $("head title").text().trim()
+
+  # Get metadata
+  _metadata: ->
+    metadata =
+      link: [{
+        href: @_getFingerPrintURI()
+      }]
+      title: @_getTitle()
+
+    documentURI = @_getDocumentURI()
+    if documentURI.toLowerCase().indexOf('file://') is 0
+        metadata.filename = new URL(documentURI).pathname.split('/').pop()
+    else
+        metadata.link.push {href: documentURI}
+
+    metadata
+
+  # Public: Get metadata (when the doc is loaded). Returns a promise.
+  getMetaData: =>
+    new Promise (resolve, reject) =>
+      if @annotator.domMapper.waitForInit?
+        @annotator.domMapper.waitForInit().then =>
+          try
+            resolve @_metadata()
+          catch error
+            reject "Internal error"
+      else
+        reject "Not a PDF dom mapper."
+
+  # We want to react to some events
+  events:
+    'beforeAnnotationCreated': 'beforeAnnotationCreated'
+
+  # This is what we do to new annotations
+  beforeAnnotationCreated: (annotation) =>
+    return unless @_isPDF()
+    annotation.document = @_metadata()

h/static/scripts/annotator/plugin/textanchors.coffee

+# This plugin implements the UI code for creating text annotations
+class Annotator.Plugin.TextAnchors extends Annotator.Plugin
+
+  # Plugin initialization
+  pluginInit: ->
+    # We need text highlights
+    unless @annotator.plugins.TextHighlights
+      throw new Error "The TextAnchors Annotator plugin requires the TextHighlights plugin."
+
+    @Annotator = Annotator
+    @$ = Annotator.$
+
+    # Register the event handlers required for creating a selection
+    $(document).bind({
+      "mouseup": @checkForEndSelection
+    })
+
+    null
+
+
+  # Code used to create annotations around text ranges =====================
+
+  # Gets the current selection excluding any nodes that fall outside of
+  # the @wrapper. Then returns and Array of NormalizedRange instances.
+  #
+  # Examples
+  #
+  #   # A selection inside @wrapper
+  #   annotation.getSelectedRanges()
+  #   # => Returns [NormalizedRange]
+  #
+  #   # A selection outside of @wrapper
+  #   annotation.getSelectedRanges()
+  #   # => Returns []
+  #
+  # Returns Array of NormalizedRange instances.
+  _getSelectedRanges: ->
+    selection = @Annotator.util.getGlobal().getSelection()
+
+    ranges = []
+    rangesToIgnore = []
+    unless selection.isCollapsed
+      ranges = for i in [0...selection.rangeCount]
+        r = selection.getRangeAt(i)
+        browserRange = new @Annotator.Range.BrowserRange(r)
+        normedRange = browserRange.normalize().limit @annotator.wrapper[0]
+
+        # If the new range falls fully outside the wrapper, we
+        # should add it back to the document but not return it from
+        # this method
+        rangesToIgnore.push(r) if normedRange is null
+
+        normedRange
+
+      # BrowserRange#normalize() modifies the DOM structure and deselects the
+      # underlying text as a result. So here we remove the selected ranges and
+      # reapply the new ones.
+      selection.removeAllRanges()
+
+    for r in rangesToIgnore
+      selection.addRange(r)
+
+    # Remove any ranges that fell outside of @wrapper.
+    @$.grep ranges, (range) ->
+      # Add the normed range back to the selection if it exists.
+      selection.addRange(range.toRange()) if range
+      range
+
+  # This is called then the mouse is released.
+  # Checks to see if a selection has been made on mouseup and if so,
+  # calls Annotator's onSuccessfulSelection method.
+  # Also resets the @mouseIsDown property.
+  #
+  # event - The event triggered this. Usually it's a mouseup Event,
+  #         but that's not necessary. The coordinates will be used,
+  #         if they are present. If the event (or the coordinates)
+  #         are missing, new coordinates will be generated, based on the
+  #         selected ranges.
+  #
+  # Returns nothing.
+  checkForEndSelection: (event = {}) =>
+    @annotator.mouseIsDown = false
+
+    # We don't care about the adder button click
+    return if @annotator.inAdderClick
+
+    # Get the currently selected ranges.
+    selectedRanges = @_getSelectedRanges()
+
+    for range in selectedRanges
+      container = range.commonAncestor
+      # TODO: what is selection ends inside a different type of highlight?
+      if @Annotator.TextHighlight.isInstance container
+        container = @Annotator.TextHighlight.getIndependentParent container
+      return if @annotator.isAnnotator(container)
+
+    if selectedRanges.length
+      event.segments = []
+      for r in selectedRanges
+        event.segments.push
+          type: "text range"
+          range: r
+
+      # Do we have valid page coordinates inside the event
+      # which has triggered this function?
+      unless event.pageX
+        # No, we don't. Adding fake coordinates
+        pos = selectedRanges[0].getEndCoords()
+        event.pageX = pos.x
+        event.pageY = pos.y #- window.scrollY
+
+      @annotator.onSuccessfulSelection event
+    else
+      @annotator.onFailedSelection event
+
+  # Strategies used for creating anchors from saved data

h/static/scripts/annotator/plugin/texthighlights.coffee

+# This plugin containts the text highlight implementation,
+# required for annotating text.
+
+class TextHighlight extends Annotator.Highlight
+  # XXX: This is a temporay workaround until the Highlighter extension
+  # PR will be merged which will restore separation properly
+  @highlightClass = 'annotator-hl'
+
+  # Save the Annotator class reference, while we have access to it.
+  # TODO: Is this really the way to go? How do other plugins do it?
+  @Annotator = Annotator
+  @$ = Annotator.$
+  @highlightType = 'TextHighlight'
+
+  # Is this element a text highlight physical anchor ?
+  @isInstance: (element) -> @$(element).hasClass 'annotator-hl'
+
+  # Find the first parent outside this physical anchor
+  @getIndependentParent: (element) ->
+    @$(element).parents(':not([class^=annotator-hl])')[0]
+
+  # List of annotators we have already set up events for
+  @_inited: []
+
+  # Collect the annotations impacted by an event
+  @getAnnotations: (event) ->
+    TextHighlight.$(event.target)
+      .parents('.annotator-hl')
+      .andSelf()
+      .map( -> TextHighlight.$(this).data("annotation"))
+      .toArray()
+
+  # Set up events for this annotator
+  @_init: (annotator) ->
+    return if annotator in @_inited
+
+    annotator.element.delegate ".annotator-hl", "mouseover", this,
+       (event) => annotator.onAnchorMouseover event
+
+    annotator.element.delegate ".annotator-hl", "mouseout", this,
+       (event) => annotator.onAnchorMouseout event
+
+    annotator.element.delegate ".annotator-hl", "mousedown", this,
+       (event) => annotator.onAnchorMousedown event
+
+    annotator.element.delegate ".annotator-hl", "click", this,
+       (event) => annotator.onAnchorClick event
+
+    @_inited.push annotator
+
+  # Public: Wraps the DOM Nodes within the provided range with a highlight
+  # element of the specified class and returns the highlight Elements.
+  #
+  # normedRange - A NormalizedRange to be highlighted.
+  # cssClass - A CSS class to use for the highlight (default: 'annotator-hl')
+  #
+  # Returns an array of highlight Elements.
+  _highlightRange: (normedRange, cssClass='annotator-hl') ->
+    white = /^\s*$/
+
+    hl = @$("<span class='#{cssClass}'></span>")
+
+    # Ignore text nodes that contain only whitespace characters. This prevents
+    # spans being injected between elements that can only contain a restricted
+    # subset of nodes such as table rows and lists. This does mean that there
+    # may be the odd abandoned whitespace node in a paragraph that is skipped
+    # but better than breaking table layouts.
+
+    nodes = @$(normedRange.textNodes()).filter((i) -> not white.test @nodeValue)
+    r = nodes.wrap(hl).parent().show().toArray()
+    for node in nodes
+      event = document.createEvent "UIEvents"
+      event.initUIEvent "domChange", true, false, window, 0
+      event.reason = "created hilite"
+      node.dispatchEvent event
+    r
+
+  constructor: (anchor, pageIndex, normedRange) ->
+    super anchor, pageIndex
+    TextHighlight._init @annotator
+
+    @$ = TextHighlight.$
+    @Annotator = TextHighlight.Annotator
+
+    # Create a highlights, and link them with the annotation
+    @_highlights = @_highlightRange normedRange
+    @$(@_highlights).data "annotation", @annotation
+
+  # Implementing the required APIs
+
+  # Is this a temporary hl?
+  isTemporary: -> @_temporary
+
+  # Mark/unmark this hl as active
+  setTemporary: (value) ->
+    @_temporary = value
+    if value
+      @$(@_highlights).addClass('annotator-hl-temporary')
+    else
+      @$(@_highlights).removeClass('annotator-hl-temporary')
+
+  # Mark/unmark this hl as focused
+  setFocused: (value) ->
+    if value
+      @$(@_highlights).addClass('annotator-hl-focused')
+    else
+      @$(@_highlights).removeClass('annotator-hl-focused')
+
+  # Remove all traces of this hl from the document
+  removeFromDocument: ->
+    for hl in @_highlights
+      # Is this highlight actually the part of the document?
+      if hl.parentNode? and @annotator.domMapper.isPageMapped @pageIndex
+        # We should restore original state
+        child = hl.childNodes[0]
+        @$(hl).replaceWith hl.childNodes
+
+        event = document.createEvent "UIEvents"
+        event.initUIEvent "domChange", true, false, window, 0
+        event.reason = "removed hilite (annotation deleted)"
+        child.parentNode.dispatchEvent event
+
+  # Get the HTML elements making up the highlight
+  _getDOMElements: -> @_highlights
+
+class Annotator.Plugin.TextHighlights extends Annotator.Plugin
+
+  # Plugin initialization
+  pluginInit: ->
+    # Export the text highlight class for other plugins
+    Annotator.TextHighlight = TextHighlight
\ No newline at end of file

h/static/scripts/annotator/plugin/textposition.coffee

+# This anchor type stores information about a piece of text,
+# described using start and end character offsets
+class TextPositionAnchor extends Annotator.Anchor
+
+  @Annotator = Annotator
+
+  constructor: (annotator, annotation, target,
+      @start, @end, startPage, endPage,
+      quote, diffHTML, diffCaseOnly) ->
+
+    super annotator, annotation, target,
+      startPage, endPage,
+      quote, diffHTML, diffCaseOnly
+
+    # This pair of offsets is the key information,
+    # upon which this anchor is based upon.
+    unless @start? then throw new Error "start is required!"
+    unless @end? then throw new Error "end is required!"
+
+    @Annotator = TextPositionAnchor.Annotator
+
+  # This is how we create a highlight out of this kind of anchor
+  _createHighlight: (page) ->
+
+    # First we create the range from the stored stard and end offsets
+    mappings = @annotator.domMapper.getMappingsForCharRange @start, @end, [page]
+
+    # Get the wanted range out of the response of DTM
+    realRange = mappings.sections[page].realRange
+
+    # Get a BrowserRange
+    browserRange = new @Annotator.Range.BrowserRange realRange
+
+    # Get a NormalizedRange
+    normedRange = browserRange.normalize @annotator.wrapper[0]
+
+    # Create the highligh
+    new @Annotator.TextHighlight this, page, normedRange
+
+
+# Annotator plugin for text position-based anchoring
+class Annotator.Plugin.TextPosition extends Annotator.Plugin
+
+  pluginInit: ->
+
+    @Annotator = Annotator
+
+    # Register the creator for text quote selectors
+    @annotator.selectorCreators.push
+      name: "TextPositionSelector"
+      describe: @_getTextPositionSelector
+
+    @annotator.anchoringStrategies.push
+      # Position-based strategy. (The quote is verified.)
+      # This can handle document structure changes,
+      # but not the content changes.
+      name: "position"
+      code: @createFromPositionSelector
+
+    # Export the anchor type
+    @Annotator.TextPositionAnchor = TextPositionAnchor
+
+  # Create a TextPositionSelector around a range
+  _getTextPositionSelector: (selection) =>
+    # We only care about "text range" selections.
+    return [] unless selection.type is "text range"
+
+    # We need dom-text-mapper - style functionality
+    return [] unless @annotator.domMapper.getStartPosForNode?
+
+    startOffset = @annotator.domMapper.getStartPosForNode selection.range.start
+    endOffset = @annotator.domMapper.getEndPosForNode selection.range.end
+
+    if startOffset? and endOffset?
+      [
+        type: "TextPositionSelector"
+        start: startOffset
+        end: endOffset
+      ]
+    else
+      # It looks like we can't determine the start and end offsets.
+      # That means no valid TextPosition selector can be generated from this.
+      unless startOffset?
+        console.log "Warning: can't generate TextPosition selector, because",
+          selection.range.start,
+          "does not have a valid start position."
+      unless endOffset?
+        console.log "Warning: can't generate TextPosition selector, because",
+          selection.range.end,
+          "does not have a valid end position."
+      [ ]
+
+  # Create an anchor using the saved TextPositionSelector.
+  # The quote is verified.
+  createFromPositionSelector: (annotation, target) =>
+
+    # We need the TextPositionSelector
+    selector = @annotator.findSelector target.selector, "TextPositionSelector"
+    return unless selector?
+
+    unless selector.start?
+      console.log "Warning: 'start' field is missing from TextPositionSelector. Skipping."
+      return null
+
+    unless selector.end?
+      console.log "Warning: 'end' field is missing from TextPositionSelector. Skipping."
+      return null
+
+    corpus = @annotator.domMapper.getCorpus?()
+    # This won't work without d-t-m
+    return null unless corpus
+
+    content = corpus[selector.start ... selector.end].trim()
+    currentQuote = @annotator.normalizeString content
+    savedQuote = @annotator.getQuoteForTarget? target
+    if savedQuote? and currentQuote isnt savedQuote
+      # We have a saved quote, let's compare it to current content
+      #console.log "Could not apply position selector" +
+      #  " [#{selector.start}:#{selector.end}] to current document," +
+      #  " because the quote has changed. " +
+      #  "(Saved quote is '#{savedQuote}'." +
+      #  " Current quote is '#{currentQuote}'.)"
+      return null
+
+    # Create a TextPositionAnchor from this data
+    new TextPositionAnchor @annotator, annotation, target,
+      selector.start, selector.end,
+      (@annotator.domMapper.getPageIndexForPos selector.start),
+      (@annotator.domMapper.getPageIndexForPos selector.end),
+      currentQuote

h/static/scripts/annotator/plugin/textquote.coffee

+# This plugin defines the TextQuote selector
+class Annotator.Plugin.TextQuote extends Annotator.Plugin
+
+  @Annotator = Annotator
+  @$ = Annotator.$
+
+  # Plugin initialization
+  pluginInit: ->
+
+    # Register the creator for text quote selectors
+    @annotator.selectorCreators.push
+      name: "TextQuoteSelector"
+      describe: @_getTextQuoteSelector
+
+    # Register function to get quote from this selector
+    @annotator.getQuoteForTarget = (target) =>
+      selector = @annotator.findSelector target.selector, "TextQuoteSelector"
+      if selector?
+        @annotator.normalizeString selector.exact
+      else
+        null
+
+  # Create a TextQuoteSelector around a range
+  _getTextQuoteSelector: (selection) =>
+    return [] unless selection.type is "text range"
+
+    unless selection.range?
+      throw new Error "Called getTextQuoteSelector() with null range!"
+
+    rangeStart = selection.range.start
+    unless rangeStart?
+      throw new Error "Called getTextQuoteSelector() on a range with no valid start."
+    rangeEnd = selection.range.end
+    unless rangeEnd?
+      throw new Error "Called getTextQuoteSelector() on a range with no valid end."
+
+    if @annotator.domMapper.getStartPosForNode?
+      # Calculate the quote and context using DTM
+
+      startOffset = @annotator.domMapper.getStartPosForNode rangeStart
+      endOffset = @annotator.domMapper.getEndPosForNode rangeEnd
+
+      if startOffset? and endOffset?
+        quote = @annotator.domMapper.getCorpus()[startOffset .. endOffset-1].trim()
+        [prefix, suffix] = @annotator.domMapper.getContextForCharRange startOffset, endOffset
+
+        [
+          type: "TextQuoteSelector"
+          exact: quote
+          prefix: prefix
+          suffix: suffix
+        ]
+      else
+        # It looks like we can't determine the start and end offsets.
+        # That means no valid TextQuote selector can be generated from this.
+        console.log "Warning: can't generate TextQuote selector.", startOffset, endOffset
+        [ ]
+    else
+      # Get the quote directly from the range
+      [
+        type: "TextQuoteSelector"
+        exact: selection.range.text().trim()
+      ]

h/static/scripts/annotator/plugin/textrange.coffee

+# This anhor type stores information about a piece of text,
+# described using the actual reference to the range in the DOM.
+#
+# When creating this kind of anchor, you are supposed to pass
+# in a NormalizedRange object, which should cover exactly
+# the wanted piece of text; no character offset correction is supported.
+#
+# Also, please note that these anchors can not really be virtualized,
+# because they don't have any truly DOM-independent information;
+# the core information stored is the reference to an object which
+# lives in the DOM. Therefore, no lazy loading is possible with
+# this kind of anchor. For that, use TextPositionAnchor instead.
+#
+# This plugin also adds a strategy to reanchor based on range selectors.
+# If the TextQuote plugin is also loaded, then it will also check
+# the saved quote against what is available now.
+#
+# If the TextPosition plugin is loaded, it will create a TextPosition
+# anchor; otherwise it will record a TextRangeAnchor.
+class TextRangeAnchor extends Annotator.Anchor
+
+  @Annotator = Annotator
+
+  constructor: (annotator, annotation, target, @range, quote) ->
+
+    super annotator, annotation, target, 0, 0, quote
+
+    unless @range? then throw new Error "range is required!"
+
+    @Annotator = TextRangeAnchor.Annotator
+
+  # This is how we create a highlight out of this kind of anchor
+  _createHighlight: ->
+
+    # Create the highligh
+    new @Annotator.TextHighlight this, 0, @range
+
+
+# Annotator plugin for creating, and anchoring based on text range
+# selectors
+class Annotator.Plugin.TextRange extends Annotator.Plugin
+
+  pluginInit: ->
+
+    @Annotator = Annotator
+
+    # Register the creator for range selectors
+    @annotator.selectorCreators.push
+      name: "RangeSelector"
+      describe: @_getRangeSelector
+
+    # Register our anchoring strategies
+    @annotator.anchoringStrategies.push
+      # Simple strategy based on DOM Range
+      name: "range"
+      code: @createFromRangeSelector
+
+    # Export these anchor types
+    @annotator.TextRangeAnchor = TextRangeAnchor
+
+
+  # Create a RangeSelector around a range
+  _getRangeSelector: (selection) =>
+    return [] unless selection.type is "text range"
+    sr = selection.range.serialize @annotator.wrapper[0], '.' + @Annotator.TextHighlight.highlightClass
+    [
+      type: "RangeSelector"
+      startContainer: sr.startContainer
+      startOffset: sr.startOffset
+      endContainer: sr.endContainer
+      endOffset: sr.endOffset
+    ]
+
+  # Create and anchor using the saved Range selector.
+  # The quote is verified.
+  createFromRangeSelector: (annotation, target) =>
+    selector = @annotator.findSelector target.selector, "RangeSelector"
+    unless selector? then return null
+
+    # Try to apply the saved XPath
+    try
+      range = @Annotator.Range.sniff selector
+      normedRange = range.normalize @annotator.wrapper[0]
+    catch error
+      return null
+
+    # Get the text of this range
+    if @annotator.domMapper.getInfoForNode?
+      # Determine the current content of the given range using DTM
+
+      startInfo = @annotator.domMapper.getInfoForNode normedRange.start
+      return null unless startInfo # Don't fret if page is not mapped
+      startOffset = startInfo.start
+      endInfo = @annotator.domMapper.getInfoForNode normedRange.end
+      return null unless endInfo # Don't fret if page is not mapped
+      endOffset = endInfo.end
+      rawQuote = @annotator.domMapper.getCorpus()[startOffset .. endOffset-1].trim()
+    else
+      # Determine the current content of the given range directly
+      rawQuote = normedRange.text().trim()
+
+    currentQuote = @annotator.normalizeString rawQuote
+
+    # Look up the saved quote
+    savedQuote = @annotator.getQuoteForTarget? target
+    if savedQuote? and currentQuote isnt savedQuote
+      #console.log "Could not apply XPath selector to current document, " +
+      #  "because the quote has changed. (Saved quote is '#{savedQuote}'." +
+      #  " Current quote is '#{currentQuote}'.)"
+      return null
+
+    if startInfo?.start? and endInfo?.end?
+      # Create a TextPositionAnchor from the start and end offsets
+      # of this range
+      # (to be used with dom-text-mapper)
+      new @Annotator.TextPositionAnchor @annotator, annotation, target,
+        startInfo.start, endInfo.end,
+        (startInfo.pageIndex ? 0), (endInfo.pageIndex ? 0),
+        currentQuote
+    else
+      # Create a TextRangeAnchor from this range
+      # (to be used whithout dom-text-mapper)
+      new TextRangeAnchor @annotator, annotation, target,
+        normedRange, currentQuote

h/static/scripts/annotator/viewer.coffee

+# Public: Creates an element for viewing annotations.
+class Annotator.Viewer extends Annotator.Widget
+
+  # Events to be bound to the @element.
+  events:
+    ".annotator-edit click":   "onEditClick"
+    ".annotator-delete click": "onDeleteClick"
+
+  # Classes for toggling annotator state.
+  classes:
+    hide: 'annotator-hide'
+    showControls: 'annotator-visible'
+
+  # HTML templates for @element and @item properties.
+  html:
+    element:"""
+            <div class="annotator-outer annotator-viewer">
+              <ul class="annotator-widget annotator-listing"></ul>
+            </div>
+            """
+    item:   """
+            <li class="annotator-annotation annotator-item">
+              <span class="annotator-controls">
+                <a href="#" title="View as webpage" class="annotator-link">View as webpage</a>
+                <button title="Edit" class="annotator-edit">Edit</button>
+                <button title="Delete" class="annotator-delete">Delete</button>
+              </span>
+            </li>
+            """
+
+  # Configuration options
+  options:
+    readOnly: false # Start the viewer in read-only mode. No controls will be shown.
+
+  # Public: Creates an instance of the Viewer object. This will create the
+  # @element from the @html.element string and set up all events.
+  #
+  # options - An Object literal containing options.
+  #
+  # Examples
+  #
+  #   # Creates a new viewer, adds a custom field and displays an annotation.
+  #   viewer = new Annotator.Viewer()
+  #   viewer.addField({
+  #     load: someLoadCallback
+  #   })
+  #   viewer.load(annotation)
+  #
+  # Returns a new Viewer instance.
+  constructor: (options) ->
+    super $(@html.element)[0], options
+
+    @item   = $(@html.item)[0]
+    @fields = []
+    @annotations = []
+
+  # Public: Displays the Viewer and first the "show" event. Can be used as an
+  # event callback and will call Event#preventDefault() on the supplied event.
+  #
+  # event - Event object provided if method is called by event
+  #         listener (default:undefined)
+  #
+  # Examples
+  #
+  #   # Displays the editor.
+  #   viewer.show()
+  #
+  #   # Displays the viewer on click (prevents default action).
+  #   $('a.show-viewer').bind('click', viewer.show)
+  #
+  # Returns itself.
+  show: (event) =>
+    util.preventEventDefault event
+
+    controls = @element
+      .find('.annotator-controls')
+      .addClass(@classes.showControls)
+    setTimeout((=> controls.removeClass(@classes.showControls)), 500)
+
+    @element.removeClass(@classes.hide)
+    this.checkOrientation().publish('show')
+
+  # Public: Checks to see if the Viewer is currently displayed.
+  #
+  # Examples
+  #
+  #   viewer.show()
+  #   viewer.isShown() # => Returns true
+  #
+  #   viewer.hide()
+  #   viewer.isShown() # => Returns false
+  #
+  # Returns true if the Viewer is visible.
+  isShown: ->
+    not @element.hasClass(@classes.hide)
+
+  # Public: Hides the Editor and fires the "hide" event. Can be used as an event
+  # callback and will call Event#preventDefault() on the supplied event.
+  #
+  # event - Event object provided if method is called by event
+  #         listener (default:undefined)
+  #
+  # Examples
+  #
+  #   # Hides the editor.
+  #   viewer.hide()
+  #
+  #   # Hide the viewer on click (prevents default action).
+  #   $('a.hide-viewer').bind('click', viewer.hide)
+  #
+  # Returns itself.
+  hide: (event) =>
+    util.preventEventDefault event
+
+    @element.addClass(@classes.hide)
+    this.publish('hide')
+
+  # Public: Loads annotations into the viewer and shows it. Fires the "load"
+  # event once the viewer is loaded passing the annotations into the callback.
+  #
+  # annotation - An Array of annotation elements.
+  #
+  # Examples
+  #
+  #   viewer.load([annotation1, annotation2, annotation3])
+  #
+  # Returns itslef.
+  load: (annotations) =>
+    @annotations = annotations || []
+
+    list = @element.find('ul:first').empty()
+    for annotation in @annotations
+      item = $(@item).clone().appendTo(list).data('annotation', annotation)
+      controls = item.find('.annotator-controls')
+
+      link = controls.find('.annotator-link')
+      edit = controls.find('.annotator-edit')
+      del  = controls.find('.annotator-delete')
+
+      links = new LinkParser(annotation.links or []).get('alternate', {'type': 'text/html'})
+      if links.length is 0 or not links[0].href?
+        link.remove()
+      else
+        link.attr('href', links[0].href)
+
+      if @options.readOnly
+        edit.remove()
+        del.remove()
+      else
+        controller = {
+          showEdit: -> edit.removeAttr('disabled')
+          hideEdit: -> edit.attr('disabled', 'disabled')
+          showDelete: -> del.removeAttr('disabled')
+          hideDelete: -> del.attr('disabled', 'disabled')
+        }
+
+      for field in @fields
+        element = $(field.element).clone().appendTo(item)[0]
+        field.load(element, annotation, controller)
+
+    this.publish('load', [@annotations])
+
+    this.show()
+
+  # Public: Adds an addional field to an annotation view. A callback can be
+  # provided to update the view on load.
+  #
+  # options - An options Object. Options are as follows:
+  #           load - Callback Function called when the view is loaded with an
+  #                  annotation. Recieves a newly created clone of @item and
+  #                  the annotation to be displayed (it will be called once
+  #                  for each annotation being loaded).
+  #
+  # Examples
+  #
+  #   # Display a user name.
+  #   viewer.addField({
+  #     # This is called when the viewer is loaded.
+  #     load: (field, annotation) ->
+  #       field = $(field)
+  #
+  #       if annotation.user
+  #         field.text(annotation.user) # Display the user
+  #       else
+  #         field.remove()              # Do not display the field.
+  #   })
+  #
+  # Returns itself.
+  addField: (options) ->
+    field = $.extend({
+      load: ->
+    }, options)
+
+    field.element = $('<div />')[0]
+    @fields.push field
+    field.element
+    this
+
+  # Callback function: called when the edit button is clicked.
+  #
+  # event - An Event object.
+  #
+  # Returns nothing.
+  onEditClick: (event) =>
+    this.onButtonClick(event, 'edit')
+
+  # Callback function: called when the delete button is clicked.
+  #
+  # event - An Event object.
+  #
+  # Returns nothing.
+  onDeleteClick: (event) =>
+    this.onButtonClick(event, 'delete')
+
+  # Fires an event of type and passes in the associated annotation.
+  #
+  # event - An Event object.
+  # type  - The type of event to fire. Either "edit" or "delete".
+  #
+  # Returns nothing.
+  onButtonClick: (event, type) ->
+    item = $(event.target).parents('.annotator-annotation')
+
+    this.publish(type, [item.data('annotation')])
+
+# Private: simple parser for hypermedia link structure
+#
+# Examples:
+#
+#   links = [
+#     { rel: 'alternate', href: 'http://example.com/pages/14.json', type: 'application/json' },
+#     { rel: 'prev': href: 'http://example.com/pages/13' }
+#   ]
+#
+#   lp = LinkParser(links)
+#   lp.get('alternate')                      # => [ { rel: 'alternate', href: 'http://...', ... } ]
+#   lp.get('alternate', {type: 'text/html'}) # => []
+#
+class LinkParser
+  constructor: (@data) ->
+
+  get: (rel, cond={}) ->
+    cond = $.extend({}, cond, {rel: rel})
+    keys = (k for own k, v of cond)
+    for d in @data
+      match = keys.reduce ((m, k) -> m and (d[k] is cond[k])), true
+      if match
+        d
+      else
+        continue

h/static/scripts/annotator/widget.coffee

+# Public: Base class for the Editor and Viewer elements. Contains methods that
+# are shared between the two.
+class Annotator.Widget extends Delegator
+  # Classes used to alter the widgets state.
+  classes:
+    hide: 'annotator-hide'
+    invert:
+      x: 'annotator-invert-x'
+      y: 'annotator-invert-y'
+
+  # Public: Creates a new Widget instance.
+  #
+  # element - The Element that represents the widget in the DOM.
+  # options - An Object literal of options.
+  #
+  # Examples
+  #
+  #   element = document.createElement('div')
+  #   widget  = new Annotator.Widget(element)
+  #
+  # Returns a new Widget instance.
+  constructor: (element, options) ->
+    super
+    @classes = $.extend {}, Annotator.Widget.prototype.classes, @classes
+
+  # Public: Unbind the widget's events and remove its element from the DOM.
+  #
+  # Returns nothing.
+  destroy: ->
+    this.removeEvents()
+    @element.remove()
+
+  checkOrientation: ->
+    this.resetOrientation()
+
+    window   = $(util.getGlobal())
+    widget   = @element.children(":first")
+    offset   = widget.offset()
+    viewport = {
+      top:   window.scrollTop(),
+      right: window.width() + window.scrollLeft()
+    }
+    current = {
+      top:   offset.top
+      right: offset.left + widget.width()
+    }
+
+    if (current.top - viewport.top) < 0
+      this.invertY()
+
+    if (current.right - viewport.right) > 0
+      this.invertX()
+
+    this
+
+  # Public: Resets orientation of widget on the X & Y axis.
+  #
+  # Examples
+  #
+  #   widget.resetOrientation() # Widget is original way up.
+  #
+  # Returns itself for chaining.
+  resetOrientation: ->
+    @element.removeClass(@classes.invert.x).removeClass(@classes.invert.y)
+    this
+
+  # Public: Inverts the widget on the X axis.
+  #
+  # Examples
+  #
+  #   widget.invertX() # Widget is now right aligned.
+  #
+  # Returns itself for chaining.
+  invertX: ->
+    @element.addClass @classes.invert.x
+    this
+
+  # Public: Inverts the widget on the Y axis.
+  #
+  # Examples
+  #
+  #   widget.invertY() # Widget is now upside down.
+  #
+  # Returns itself for chaining.
+  invertY: ->
+    @element.addClass @classes.invert.y
+    this
+
+  # Public: Find out whether or not the widget is currently upside down
+  #
+  # Returns a boolean: true if the widget is upside down
+  isInvertedY: ->
+    @element.hasClass @classes.invert.y
+
+  # Public: Find out whether or not the widget is currently right aligned
+  #
+  # Returns a boolean: true if the widget is right aligned
+  isInvertedX: ->
+    @element.hasClass @classes.invert.x

h/static/scripts/annotator/xpath.coffee

+# A simple XPath evaluator using jQuery which can evaluate queries of
+simpleXPathJQuery = (relativeRoot) ->
+  jq = this.map ->
+    path = ''
+    elem = this
+
+    while elem?.nodeType == Node.ELEMENT_NODE and elem isnt relativeRoot
+      tagName = elem.tagName.replace(":", "\\:")
+      idx = $(elem.parentNode).children(tagName).index(elem) + 1
+
+      idx  = "[#{idx}]"
+      path = "/" + elem.tagName.toLowerCase() + idx + path
+      elem = elem.parentNode
+
+    path
+
+  jq.get()
+
+# A simple XPath evaluator using only standard DOM methods which can
+# evaluate queries of the form /tag[index]/tag[index].
+simpleXPathPure = (relativeRoot) ->
+
+  getPathSegment = (node) ->
+    name = getNodeName node
+    pos = getNodePosition node
+    "#{name}[#{pos}]"
+
+  rootNode = relativeRoot
+
+  getPathTo = (node) ->
+    xpath = '';
+    while node != rootNode
+      unless node?
+        throw new Error "Called getPathTo on a node which was not a descendant of @rootNode. " + rootNode
+      xpath = (getPathSegment node) + '/' + xpath
+      node = node.parentNode
+    xpath = '/' + xpath
+    xpath = xpath.replace /\/$/, ''
+    xpath
+
+  jq = this.map ->
+    path = getPathTo this
+
+    path
+
+  jq.get()
+
+findChild = (node, type, index) ->
+  unless node.hasChildNodes()
+    throw new Error "XPath error: node has no children!"
+  children = node.childNodes
+  found = 0
+  for child in children
+    name = getNodeName child
+    if name is type
+      found += 1
+      if found is index
+        return child
+  throw new Error "XPath error: wanted child not found."
+
+# Get the node name for use in generating an xpath expression.
+getNodeName = (node) ->
+    nodeName = node.nodeName.toLowerCase()
+    switch nodeName
+      when "#text" then return "text()"
+      when "#comment" then return "comment()"
+      when "#cdata-section" then return "cdata-section()"
+      else return nodeName
+
+# Get the index of the node as it appears in its parent's child list
+getNodePosition = (node) ->
+  pos = 0
+  tmp = node
+  while tmp
+    if tmp.nodeName is node.nodeName
+      pos++
+    tmp = tmp.previousSibling
+  pos
\ No newline at end of file

h/static/scripts/vendor/annotator.auth.js

-// Generated by CoffeeScript 1.6.3
-/*
-** Annotator 1.2.6-dev-9e0eff3
-** https://github.com/okfn/annotator/
-**
-** Copyright 2012 Aron Carroll, Rufus Pollock, and Nick Stenning.
-** Dual licensed under the MIT and GPLv3 licenses.
-** https://github.com/okfn/annotator/blob/master/LICENSE
-**
-** Built at: 2014-09-25 22:40:54Z
-*/
-
-
-
-/*
-//
-*/
-
-// Generated by CoffeeScript 1.6.3
-(function() {
-  var base64Decode, base64UrlDecode, createDateFromISO8601, parseToken,
-    __hasProp = {}.hasOwnProperty,
-    __extends = function(child, parent) { for (var key in parent) { if (__hasProp.call(parent, key)) child[key] = parent[key]; } function ctor() { this.constructor = child; } ctor.prototype = parent.prototype; child.prototype = new ctor(); child.__super__ = parent.prototype; return child; };
-
-  createDateFromISO8601 = function(string) {
-    var d, date, offset, regexp, time, _ref;
-    regexp = "([0-9]{4})(-([0-9]{2})(-([0-9]{2})" + "(T([0-9]{2}):([0-9]{2})(:([0-9]{2})(\.([0-9]+))?)?" + "(Z|(([-+])([0-9]{2}):([0-9]{2})))?)?)?)?";
-    d = string.match(new RegExp(regexp));
-    offset = 0;
-    date = new Date(d[1], 0, 1);
-    if (d[3]) {
-      date.setMonth(d[3] - 1);
-    }
-    if (d[5]) {
-      date.setDate(d[5]);
-    }
-    if (d[7]) {
-      date.setHours(d[7]);
-    }
-    if (d[8]) {
-      date.setMinutes(d[8]);
-    }
-    if (d[10]) {
-      date.setSeconds(d[10]);
-    }
-    if (d[12]) {
-      date.setMilliseconds(Number("0." + d[12]) * 1000);
-    }
-    if (d[14]) {
-      offset = (Number(d[16]) * 60) + Number(d[17]);
-      offset *= (_ref = d[15] === '-') != null ? _ref : {
-        1: -1
-      };
-    }
-    offset -= date.getTimezoneOffset();
-    time = Number(date) + (offset * 60 * 1000);
-    date.setTime(Number(time));
-    return date;
-  };
-
-  base64Decode = function(data) {
-    var ac, b64, bits, dec, h1, h2, h3, h4, i, o1, o2, o3, tmp_arr;
-    if (typeof atob !== "undefined" && atob !== null) {
-      return atob(data);
-    } else {
-      b64 = "ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz0123456789+/=";
-      i = 0;
-      ac = 0;
-      dec = "";
-      tmp_arr = [];
-      if (!data) {
-        return data;
-      }
-      data += '';
-      while (i < data.length) {
-        h1 = b64.indexOf(data.charAt(i++));
-        h2 = b64.indexOf(data.charAt(i++));
-        h3 = b64.indexOf(data.charAt(i++));
-        h4 = b64.indexOf(data.charAt(i++));
-        bits = h1 << 18 | h2 << 12 | h3 << 6 | h4;
-        o1 = bits >> 16 & 0xff;
-        o2 = bits >> 8 & 0xff;
-        o3 = bits & 0xff;
-        if (h3 === 64) {
-          tmp_arr[ac++] = String.fromCharCode(o1);
-        } else if (h4 === 64) {
-          tmp_arr[ac++] = String.fromCharCode(o1, o2);
-        } else {
-          tmp_arr[ac++] = String.fromCharCode(o1, o2, o3);
-        }
-      }
-      return tmp_arr.join('');
-    }
-  };
-
-  base64UrlDecode = function(data) {
-    var i, m, _i, _ref;
-    m = data.length % 4;
-    if (m !== 0) {
-      for (i = _i = 0, _ref = 4 - m; 0 <= _ref ? _i < _ref : _i > _ref; i = 0 <= _ref ? ++_i : --_i) {
-        data += '=';
-      }
-    }
-    data = data.replace(/-/g, '+');
-    data = data.replace(/_/g, '/');
-    return base64Decode(data);
-  };
-
-  parseToken = function(token) {
-    var head, payload, sig, _ref;
-    _ref = token.split('.'), head = _ref[0], payload = _ref[1], sig = _ref[2];
-    return JSON.parse(base64UrlDecode(payload));
-  };
-
-  Annotator.Plugin.Auth = (function(_super) {
-    __extends(Auth, _super);
-
-    Auth.prototype.options = {
-      token: null,
-      tokenUrl: '/auth/token',
-      autoFetch: true
-    };
-
-    function Auth(element, options) {
-      Auth.__super__.constructor.apply(this, arguments);
-      this.waitingForToken = [];
-      if (this.options.token) {
-        this.setToken(this.options.token);
-      } else {
-        this.requestToken();
-      }
-    }
-
-    Auth.prototype.requestToken = function() {
-      var _this = this;
-      this.requestInProgress = true;
-      return $.ajax({
-        url: this.options.tokenUrl,
-        dataType: 'text',
-        xhrFields: {
-          withCredentials: true
-        }
-      }).done(function(data, status, xhr) {
-        return _this.setToken(data);
-      }).fail(function(xhr, status, err) {
-        var msg;
-        msg = Annotator._t("Couldn't get auth token:");
-        console.error("" + msg + " " + err, xhr);
-        return Annotator.showNotification("" + msg + " " + xhr.responseText, Annotator.Notification.ERROR);
-      }).always(function() {
-        return _this.requestInProgress = false;
-      });
-    };
-
-    Auth.prototype.setToken = function(token) {
-      var _results,
-        _this = this;
-      this.token = token;
-      this._unsafeToken = parseToken(token);
-      if (this.haveValidToken()) {
-        if (this.options.autoFetch) {
-          this.refreshTimeout = setTimeout((function() {
-            return _this.requestToken();
-          }), (this.timeToExpiry() - 2) * 1000);
-        }
-        this.updateHeaders();
-        _results = [];
-        while (this.waitingForToken.length > 0) {
-          _results.push(this.waitingForToken.pop()(this._unsafeToken));
-        }
-        return _results;
-      } else {
-        console.warn(Annotator._t("Didn't get a valid token."));
-        if (this.options.autoFetch) {
-          console.warn(Annotator._t("Getting a new token in 10s."));
-          return setTimeout((function() {
-            return _this.requestToken();
-          }), 10 * 1000);
-        }
-      }
-    };
-
-    Auth.prototype.haveValidToken = function() {
-      var allFields;
-      allFields = this._unsafeToken && this._unsafeToken.issuedAt && this._unsafeToken.ttl && this._unsafeToken.consumerKey;
-      if (allFields && this.timeToExpiry() > 0) {
-        return true;
-      } else {
-        return false;
-      }
-    };
-
-    Auth.prototype.timeToExpiry = function() {
-      var expiry, issue, now, timeToExpiry;
-      now = new Date().getTime() / 1000;
-      issue = createDateFromISO8601(this._unsafeToken.issuedAt).getTime() / 1000;
-      expiry = issue + this._unsafeToken.ttl;
-      timeToExpiry = expiry - now;
-      if (timeToExpiry > 0) {
-        return timeToExpiry;
-      } else {
-        return 0;
-      }
-    };
-
-    Auth.prototype.updateHeaders = function() {
-      var current;
-      current = this.element.data('annotator:headers');
-      return this.element.data('annotator:headers', $.extend(current, {
-        'x-annotator-auth-token': this.token
-      }));
-    };
-
-    Auth.prototype.withToken = function(callback) {
-      if (callback == null) {
-        return;
-      }
-      if (this.haveValidToken()) {
-        return callback(this._unsafeToken);
-      } else {
-        this.waitingForToken.push(callback);
-        if (!this.requestInProgress) {
-          return this.requestToken();
-        }
-      }
-    };
-
-    return Auth;
-
-  })(Annotator.Plugin);
-
-}).call(this);

h/static/scripts/vendor/annotator.document.js

-// Generated by CoffeeScript 1.6.3
-/*
-** Annotator 1.2.6-dev-b8c7514
-** https://github.com/okfn/annotator/
-**
-** Copyright 2012 Aron Carroll, Rufus Pollock, and Nick Stenning.
-** Dual licensed under the MIT and GPLv3 licenses.
-** https://github.com/okfn/annotator/blob/master/LICENSE
-**
-** Built at: 2014-12-15 12:18:02Z
-*/
-
-
-
-/*
-//
-*/
-
-// Generated by CoffeeScript 1.6.3
-(function() {
-  var _ref,
-    __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; },
-    __hasProp = {}.hasOwnProperty,
-    __extends = function(child, parent) { for (var key in parent) { if (__hasProp.call(parent, key)) child[key] = parent[key]; } function ctor() { this.constructor = child; } ctor.prototype = parent.prototype; child.prototype = new ctor(); child.__super__ = parent.prototype; return child; },
-    __indexOf = [].indexOf || function(item) { for (var i = 0, l = this.length; i < l; i++) { if (i in this && this[i] === item) return i; } return -1; };
-
-  Annotator.Plugin.Document = (function(_super) {
-    var $;
-
-    __extends(Document, _super);
-
-    function Document() {
-      this._getDocOwners = __bind(this._getDocOwners, this);
-      this._getFavicon = __bind(this._getFavicon, this);
-      this._getLinks = __bind(this._getLinks, this);
-      this._getTitle = __bind(this._getTitle, this);
-      this._getMetaTags = __bind(this._getMetaTags, this);
-      this._getEprints = __bind(this._getEprints, this);
-      this._getPrism = __bind(this._getPrism, this);
-      this._getDublinCore = __bind(this._getDublinCore, this);
-      this._getTwitter = __bind(this._getTwitter, this);
-      this._getFacebook = __bind(this._getFacebook, this);
-      this._getHighwire = __bind(this._getHighwire, this);
-      this.getDocumentMetadata = __bind(this.getDocumentMetadata, this);
-      this.beforeAnnotationCreated = __bind(this.beforeAnnotationCreated, this);
-      this.uris = __bind(this.uris, this);
-      this.uri = __bind(this.uri, this);
-      _ref = Document.__super__.constructor.apply(this, arguments);
-      return _ref;
-    }
-
-    $ = Annotator.$;
-
-    Document.prototype.events = {
-      'beforeAnnotationCreated': 'beforeAnnotationCreated'
-    };
-
-    Document.prototype.pluginInit = function() {
-      return this.getDocumentMetadata();
-    };
-
-    Document.prototype.uri = function() {
-      var link, uri, _i, _len, _ref1;
-      uri = decodeURIComponent(document.location.href);
-      _ref1 = this.metadata.link;
-      for (_i = 0, _len = _ref1.length; _i < _len; _i++) {
-        link = _ref1[_i];
-        if (link.rel === "canonical") {
-          uri = link.href;
-        }
-      }
-      return uri;
-    };
-
-    Document.prototype.uris = function() {
-      var href, link, uniqueUrls, _i, _len, _ref1;
-      uniqueUrls = {};
-      _ref1 = this.metadata.link;
-      for (_i = 0, _len = _ref1.length; _i < _len; _i++) {
-        link = _ref1[_i];
-        if (link.href) {
-          uniqueUrls[link.href] = true;
-        }
-      }
-      return (function() {
-        var _results;
-        _results = [];
-        for (href in uniqueUrls) {
-          _results.push(href);
-        }
-        return _results;
-      })();
-    };
-
-    Document.prototype.beforeAnnotationCreated = function(annotation) {
-      return annotation.document = this.metadata;
-    };
-
-    Document.prototype.getDocumentMetadata = function() {
-      this.metadata = {};
-      this._getHighwire();
-      this._getDublinCore();
-      this._getFacebook();
-      this._getEprints();
-      this._getPrism();
-      this._getTwitter();
-      this._getFavicon();
-      this._getDocOwners();
-      this._getTitle();
-      this._getLinks();
-      return this.metadata;
-    };
-
-    Document.prototype._getHighwire = function() {
-      return this.metadata.highwire = this._getMetaTags("citation", "name", "_");
-    };
-
-    Document.prototype._getFacebook = function() {
-      return this.metadata.facebook = this._getMetaTags("og", "property", ":");
-    };
-
-    Document.prototype._getTwitter = function() {
-      return this.metadata.twitter = this._getMetaTags("twitter", "name", ":");
-    };
-
-    Document.prototype._getDublinCore = function() {
-      return this.metadata.dc = this._getMetaTags("dc", "name", ".");
-    };
-
-    Document.prototype._getPrism = function() {
-      return this.metadata.prism = this._getMetaTags("prism", "name", ".");
-    };
-
-    Document.prototype._getEprints = function() {
-      return this.metadata.eprints = this._getMetaTags("eprints", "name", ".");
-    };
-
-    Document.prototype._getMetaTags = function(prefix, attribute, delimiter) {
-      var content, match, meta, n, name, tags, _i, _len, _ref1;
-      tags = {};
-      _ref1 = $("meta");
-      for (_i = 0, _len = _ref1.length; _i < _len; _i++) {
-        meta = _ref1[_i];
-        name = $(meta).attr(attribute);
-        content = $(meta).prop("content");
-        if (name) {
-          match = name.match(RegExp("^" + prefix + delimiter + "(.+)$", "i"));
-          if (match) {
-            n = match[1];
-            if (tags[n]) {
-              tags[n].push(content);
-            } else {
-              tags[n] = [content];
-            }
-          }
-        }
-      }
-      return tags;
-    };
-
-    Document.prototype._getTitle = function() {
-      if (this.metadata.highwire.title) {
-        return this.metadata.title = this.metadata.highwire.title[0];
-      } else if (this.metadata.eprints.title) {
-        return this.metadata.title = this.metadata.eprints.title;
-      } else if (this.metadata.prism.title) {
-        return this.metadata.title = this.metadata.prism.title;
-      } else if (this.metadata.facebook.title) {
-        return this.metadata.title = this.metadata.facebook.title;
-      } else if (this.metadata.twitter.title) {
-        return this.metadata.title = this.metadata.twitter.title;
-      } else if (this.metadata.dc.title) {
-        return this.metadata.title = this.metadata.dc.title;
-      } else {
-        return this.metadata.title = $("head title").text();
-      }
-    };
-
-    Document.prototype._getLinks = function() {
-      var doi, dropTypes, href, id, l, link, name, rel, relTypes, type, url, values, _i, _j, _k, _len, _len1, _len2, _ref1, _ref2, _ref3, _results;
-      this.metadata.link = [
-        {
-          href: document.location.href
-        }
-      ];
-      _ref1 = $("link");
-      for (_i = 0, _len = _ref1.length; _i < _len; _i++) {
-        link = _ref1[_i];
-        l = $(link);
-        href = this._absoluteUrl(l.prop('href'));
-        rel = l.prop('rel');
-        type = l.prop('type');
-        relTypes = ["alternate", "canonical", "bookmark", "shortlink"];
-        dropTypes = ["application/rss+xml", "application/atom+xml"];
-        if (__indexOf.call(relTypes, rel) >= 0 && __indexOf.call(dropTypes, type) < 0) {
-          this.metadata.link.push({
-            href: href,
-            rel: rel,
-            type: type
-          });
-        }
-      }
-      _ref2 = this.metadata.highwire;
-      for (name in _ref2) {
-        values = _ref2[name];
-        if (name === "pdf_url") {
-          for (_j = 0, _len1 = values.length; _j < _len1; _j++) {
-            url = values[_j];
-            this.metadata.link.push({
-              href: this._absoluteUrl(url),
-              type: "application/pdf"
-            });
-          }
-        }
-        if (name === "doi") {
-          for (_k = 0, _len2 = values.length; _k < _len2; _k++) {
-            doi = values[_k];
-            if (doi.slice(0, 4) !== "doi:") {
-              doi = "doi:" + doi;
-            }
-            this.metadata.link.push({
-              href: doi
-            });
-          }
-        }
-      }
-      _ref3 = this.metadata.dc;
-      _results = [];
-      for (name in _ref3) {
-        values = _ref3[name];
-        if (name === "identifier") {
-          _results.push((function() {
-            var _l, _len3, _results1;
-            _results1 = [];
-            for (_l = 0, _len3 = values.length; _l < _len3; _l++) {
-              id = values[_l];
-              if (id.slice(0, 4) === "doi:") {
-                _results1.push(this.metadata.link.push({
-                  href: id
-                }));
-              } else {
-                _results1.push(void 0);
-              }
-            }
-            return _results1;
-          }).call(this));
-        } else {
-          _results.push(void 0);
-        }
-      }
-      return _results;
-    };
-
-    Document.prototype._getFavicon = function() {
-      var link, _i, _len, _ref1, _ref2, _results;
-      _ref1 = $("link");
-      _results = [];
-      for (_i = 0, _len = _ref1.length; _i < _len; _i++) {
-        link = _ref1[_i];
-        if ((_ref2 = $(link).prop("rel")) === "shortcut icon" || _ref2 === "icon") {
-          _results.push(this.metadata["favicon"] = this._absoluteUrl(link.href));
-        } else {
-          _results.push(void 0);
-        }
-      }
-      return _results;
-    };
-
-    Document.prototype._getDocOwners = function() {
-      var a, _i, _len, _ref1, _results;
-      this.metadata.reply_to = [];
-      _ref1 = $("a");
-      _results = [];
-      for (_i = 0, _len = _ref1.length; _i < _len; _i++) {
-        a = _ref1[_i];
-        if (a.rel === 'reply-to') {
-          if (a.href.toLowerCase().slice(0, 7) === "mailto:") {
-            _results.push(this.metadata.reply_to.push(a.href.slice(7)));
-          } else {
-            _results.push(this.metadata.reply_to.push(a.href));
-          }
-        } else {
-          _results.push(void 0);
-        }
-      }
-      return _results;
-    };
-
-    Document.prototype._absoluteUrl = function(url) {
-      var d;
-      d = document.createElement('a');
-      d.href = url;
-      return d.href;
-    };
-
-    return Document;
-
-  })(Annotator.Plugin);
-
-}).call(this);

h/static/scripts/vendor/annotator.domtextmapper.js

-// Generated by CoffeeScript 1.6.3
-/*
-** Annotator 1.2.6-dev-9e0eff3
-** https://github.com/okfn/annotator/
-**
-** Copyright 2012 Aron Carroll, Rufus Pollock, and Nick Stenning.
-** Dual licensed under the MIT and GPLv3 licenses.
-** https://github.com/okfn/annotator/blob/master/LICENSE
-**
-** Built at: 2014-09-25 22:40:58Z
-*/
-
-
-
-/*
-//
-*/
-
-// Generated by CoffeeScript 1.6.3
-(function() {
-  var _ref,
-    __hasProp = {}.hasOwnProperty,
-    __extends = function(child, parent) { for (var key in parent) { if (__hasProp.call(parent, key)) child[key] = parent[key]; } function ctor() { this.constructor = child; } ctor.prototype = parent.prototype; child.prototype = new ctor(); child.__super__ = parent.prototype; return child; };
-
-  Annotator.Plugin.DomTextMapper = (function(_super) {
-    __extends(DomTextMapper, _super);
-
-    function DomTextMapper() {
-      _ref = DomTextMapper.__super__.constructor.apply(this, arguments);
-      return _ref;
-    }
-
-    DomTextMapper.prototype.pluginInit = function() {
-      var _this = this;
-      if (this.options.skip) {
-        console.log("Not registering DOM-Text-Mapper.");
-        return;
-      }
-      return this.annotator.documentAccessStrategies.unshift({
-        name: "DOM-Text-Mapper",
-        mapper: window.DomTextMapper,
-        init: function() {
-          return _this.annotator.domMapper.setRootNode(_this.annotator.wrapper[0]);
-        }
-      });
-    };
-
-    return DomTextMapper;
-
-  })(Annotator.Plugin);
-
-}).call(this);

karma.config.js

@@ -33,19 +33,16 @@ module.exports = function(config) {
       'h/static/scripts/vendor/Markdown.Converter.js',
       'h/static/scripts/vendor/unorm.js',
       'h/static/scripts/vendor/uuid.js',
-      'h/static/scripts/vendor/gettext.js',
-      'h/static/scripts/vendor/annotator.js',
-      'h/static/scripts/vendor/annotator.auth.js',
-      'h/static/scripts/vendor/annotator.document.js',
-      'h/static/scripts/plugin/bridge.js',
-      'h/static/scripts/plugin/discovery.js',
-      'h/static/scripts/plugin/threading.js',
+      'h/static/scripts/annotator/annotator.min.js',
+      'h/static/scripts/annotator/plugin/auth.js',
+      'h/static/scripts/annotator/plugin/bridge.js',
+      'h/static/scripts/annotator/plugin/bucket-bar.js',
+      'h/static/scripts/annotator/plugin/threading.js',
       'h/static/scripts/app.js',
       'h/static/scripts/account.js',
       'h/static/scripts/helpers.js',
       'h/static/scripts/session.js',
       'h/static/scripts/hypothesis.js',
-      'h/static/scripts/plugin/bucket-bar.js',
       'h/static/scripts/vendor/sinon.js',
       'h/static/scripts/vendor/chai.js',
       'h/static/scripts/hypothesis.js',